Strain | Pseudomonas fluorescens F113 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCCACTGCAGCACCGCGTTGGCGAAGATCACGTCGAACGGCCCGGGCTCATCCCATTGGCCGATGTCGGCAGTGTCGAACGCCACGGCGGGCAAGCGTTT GCGTGCGGCGTCGACCATGTCGCTGGAACTGTCCAGGCCGCGCACTGTGGCGCCGCTGAAATGTTCCACCAACAGCTCGGTGGAATTGCCCGGGCCGCAC CCCAGGTCGATCACCGAGCGGGCCTGTGTGTGGGGGATGGCGGCGAGCAGGTCCCGGGACGGACGGGTGCGTTCCTGTTCGAAGGTGACGTATTGCTTGG CGGACCAGCCCATGGCGTTCTCCTGTGTGGTGCAGTGATCGAGGTGCCGCCAGTATAAGGTCGTGTGGGAAGATGAGCCGCGTTATCGTTCATCGCGGGC AAGCCTTGCTCCCACAACGTAGCGAACGTCACGGTTTTGACTAATTCCATGGGTTACGATTTCGTTATGTTCCCTACACGACCGATCGGAGAAAACCGCA
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DNA Sequence for Gene |
>PSF113_1836
GTGACCCAACTGACCCTGCTGTGCCTGCCTTATTCCGGCGCCAGCGCGATGGTGTACAGCCGCTGGCGGCGCACGTTGCCGCAGTGGCTGCACGTGCAGC CGGTGGAGCTGCCGGGACGCGGAGCGCGCTTCGACGAGCCGCTGCACACTGACATGGGGCTATTGGCGATGCAGTTGGCACGGGAGTTGTCCGCGACGCT CCAGGCCCCGTACGCATTGTTCGGTCATAGCCTGGGCGCGCTGCTGGCCTGCGAGATCGGCCATGCCCTGCGTGAGCTCGGCTGCCCGGAACCGGTGGCG CTGTTTGCGTCCGGCACCGCGGCGCCGACGATGCGCGCCGACTACGACCGCGGTTTCGCCGAGCCGAAAACCGACGCTGAACTGATCGAGCAACTGCGCA CCCTCAACGGTACGAGCGAGGAGATCCTGGCCAATGAAGAGCTGATGGCCTTGACCTTGCCGGTCCTGCGGGCAGACTTTCTGCTGTGTGGACGCTTCCA GCCGCGGCAGCGGCCGCTGCTCAACTGTCCGGTGCACGTGTTCGGCGGCACGGCCGACAAGGCCACCACGGAGCAACTGATGGGCTGGCGCCAGGAAACC ACGGGCAGCTTCTCGGTGGACATGCTGGCGGGCGGGCACTTCTTCATTCATGAGCACGAGGCCAAGGTGCTGCGGCTGATCAAGGATCAGTTGAGCGTGC ATCATCGGCGGCATGGGTTGGCGATCAGTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTTGATTCCCAGGCTCATTCAAATTCAGCCCCACAGTGGATGGGGGTGATACATCCCCCTGTGGGAGCGAGCTTGCTCGCGATAGCGGTGGGTCAGCTTG CTGTTCGTTGACTGACACGACACTATCGCGAGCAAGCTCGCTCCCACATTGCTCGCACACATTTAGGGGCTGCATCCTTCTGAAAATCCCCGTTCTGCCT CTCTTCCTGACACTTGTTCCCAAACGCTAATTTTTCCGGTTTGCATTCGTTTCATAGGGACGACTTGCCTTTGTGCCTTGTGCCCACTGATTCCGGATAC CCCAGAAATGAATGCTGAAGACGCCTTGAAACTTGCTCGCCGGTTTATCGGGTTGCCCCTGGAAAAGCGCCGGATGTTCCTGGCCGCGTTGGACAAGGAG GGCGTGGAGTTCAGCGGTTTCCCCATCCCCCGGGGCGTCGAGGCCGAGGATCGCCAGGCGTTGTCCTATGCCCAGCAGCGCATGTGGTTTCTCTGGCAGC
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Amino Acid Sequence |
>putative thioesterase involved in non-ribosomal peptide biosynthesis
MTQLTLLCLPYSGASAMVYSRWRRTLPQWLHVQPVELPGRGARFDEPLHTDMGLLAMQLARELSATLQAPYALFGHSLGALLACEIGHALRELGCPEPVA LFASGTAAPTMRADYDRGFAEPKTDAELIEQLRTLNGTSEEILANEELMALTLPVLRADFLLCGRFQPRQRPLLNCPVHVFGGTADKATTEQLMGWRQET TGSFSVDMLAGGHFFIHEHEAKVLRLIKDQLSVHHRRHGLAISA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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