Pseudomonas fluorescens F113, PSF113_1686 (oprI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
ATAGTAGGCACCAATGACGCAAATGCTCAAGGCACGCCTGTCATCGAAGGGGGTAAACCTGGTCGGGTTTATCGATTGAGCGCCATCGTCGCGCTGCAGT CGGTCACGGTGCAATAGCTGAACATCGCCAGTTGTTGAGTCTTGAGACGAGCGCGCGTAGTTAAAGTCACCGCCAATACCAATAAAGATGCCTGGAGGAC TGCACAAAAAATGTACAAAAGTGTAGGTGAATCAATAAACAACGACGTTAGCGTGGGCTGCAAGAGTTCGCCCCGCCGCGGAACTTTTTTCCGCCGACGC GCTCCAGCCAAGGGCTTGGGGCTGTATATTTTTTAAACAATCCGAAGAAAAGTTGCTCGAAAAAGAATCACCGCCTACAATTTTTTTGCTTCTTGCGCTA CGTCAGTTTACTTACTACAAGTAATGGGTAGTATGTACGCCGGCTAACTCCTCAGTCTGGGGAGACAGTCACTAATAGAAAGTCCTTGAAGGGGAAACCG
DNA Sequence for Gene
>PSF113_1686 |oprI
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCCCTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGCATCGAAAGAAACCGAAGCACGTCTGACTGCTA CCGAAGACGCAGCAGCTCGCTCCCAGGCTCGTGCAGACGAAGCTTACCGTAAAGCTGATGAAGCTCTGGCTGCTGCTCAAAAAGCACAACAGACTGCTGA CGAAGCTAACGAGCGTGCTCTGCGCATGCTGGAAAAAGCTAGCCGCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGTCCTTCGGGATTGTTATCGAGCCGACCCATTTTTGGGTCGGCTTTTTTATTGCTTGAGTTTTAGCAGGCAATAAAAACCCGCCGACATCGCGAAACG TCGGCGGGTTGTTTTCGAGTTTTTTACTGCTGCAAGTCGATCGGCGCGCTCGTGACCATCGGTGCCGAGGTGTTCGGAATAGCGATTTCCACCGGCAGGC CATCTTCGGCCGCCACCACGTCCCGCACCACGTCCCAGTTCATGCGCAAGTTGCTGGTGATGTCTTCACGCTTGAGCATCGCGTTGATCACTGCGGTGTG CTTGTCCACCACCGACGGGTTGCCCTTGTCGTCCAACGGTGTGTGAGCTTCCAGGTACACCTTGCCACCGCTCAAGCCCAGCTTGTAAGGGTCGTTGATG ATCCGTACCGATGTACCCACCGGCACCATGCCGGCCATTTCCAGGACGTTGTTGTTGAACATCCGGAAGCAGCCGTGGCTGGTCCGCATGCCGATGCCGA
Amino Acid Sequence
>protein OprI
MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARSQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKASRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site