Pseudomonas fluorescens F113, PSF113_1583 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens F113 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTGTTGCAGGCGCTGTTGGCCGAGCAAGTGCCTGTGCGCGACATACGCAGTATTGCCGAGGCTATCGCCAACAACGCTTCCAAGAGTCAAGATACCG CCGCCCTGGTGGCTGCGGTTCGGGTCGGTGTGTCCCGCGCAATCGTCCAAAGCATTGTAGGCACTGAGTCTGAGCTGCCTGTGATCACCTTGGAGCCAAG GTTGGAACAGATATTGCTCAATAGTCTGCAGAAGGCAGGACAAGGCTCGGAAGAGGGTGTTCTGCTGGAGCCAAGCATGGCCGAGAAGCTGCAGCGTTCG CTGATCGAAGCAGCCCAGCGGCAAGAGATGCAAGGCCAGCCGGTGATCCTGCTGGTGGCCGGTCCGATTCGCACGATGCTCTCGCGATTCGGGCGCCTCG CGGTCCCGGGGCTGCATGTGCTGGCGTACCAGGAAATACCGGACAACAAGCAAGTGACCATCGTTGCGACAGTAGGGCCCAACGGCTGAGGTAGTGGTTT
|
|
| DNA Sequence for Gene |
>PSF113_1583
|flhF
ATGCAAGTGAAGCGTTTTTTCGCCGCAGACATGCGTCAGGCCATGAAACTGGTTCGTGACGAGCTGGGCGCTGAAGCAGCCATCATTGGCAACCGTCGTA TCGCCGGCGGTGTCGAGCTGACGGCTGCCCTGGATTACAAGCTGTCTGCGTTGGCCCCGCGGGTTCCGAACATGGAACTCGAAGACGAGCTGCGCAAGAC CCAATCGCGCATCGCCAGCGCCCAGGCCGAACTGAGCCTGCGCAGCAACGAAGGCGAGGGCGCGGCGGGCACCAATCGTCAATTGTTCGCCGGTCAGCCG CTGACTGCCGGCCTGCCGTTGACCGCTGCCGAACCGCTGATCGAGCAGGCCCAAGCCGAACCGCGTCGTCCGGAGCCGGCGCCAGCAGCGCCTGCCCGGG GTGTCGACCCGCGCGCCCTGGACTCGATGCGCTTTGAACTCAACAGCCTGCGCGAGCTGATGGAAGTCCAGCTCGGCTCCCTGGCCTGGAACCAGCTGCA AGGCAGCCGTCCAGCCCAGGCCAACCTGTGGCGTCGCCTGCAACGCATCGGCCTGTCCGGTCCGTTGTCCCGGGACCTGCTGGCGCTGATCAATGGTATC GAAGAGCCTCGCCAGGCCTGGCGCATGTTGCTGGCGCACCTGGCGCGGATGATCTCCACGCCGGAAGTCGAGCCGCTGGAAGAGGGAGGGGTGATTGCCA TGGTCGGTCCTGCCGGCATGGGCAAGACCACCACCCTGGCCAAGCTCGCCGCCCGTTACGTACTCAAGTACGGCGCCCAGAGCATTGCCCTGGTGAGCAT GGACAGTTTCCGCATCGGTGCCCAGGAGCAACTCAAGACCCTCGGCCGGATTCTCAATGTGTCGGTGACCCATGTGGATCCGGGTCAATCCCTGGCCCAG GCACTGGAGCCGCTGCTGCGCAAACGCGTCGTGCTGATCGATACCGCGGGCCTGCAAGCCAGCGATCCAGCCCTGCGCATGCAGCTCGAGAGCCTGGCCG GACGCGGTATCAAGTCAAAAAATTATCTCGTGTTGGCAACCACCAGCCAGAAACAGGTTCTAACCGCCGCATACCACAGCTACAAACGTTGCGGGCTGGC CGGCTGCATCCTGACTAAGCTGGACGAAACGGCAAGCCTGGGCGAGGTGTTGAGCCTGGCGATCGGTCATGAATTACCGGTGGCCTACCTGACCGACGGG CCGCGGATCCCGGATGATTTGCATCTGCCGCGCCGTCATCAACTGGTCAGTCGTGCCGTGAGTGTGCAAATGCAGGAAGAACCCAGCGAAGAAGCCATGG CTGATATGTTCGCTGATATCTACCACAGCCCGACCAAGCAGGTCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTAATCATGAATATTTTTTGTACCTACATCGATGGTCTGCCATGCATTGTTCCGTATGCGAACGCGCAGCCAGTAATGTGGCCTCCGTCTAAGTAAGAC AAGGTAAAGAACGAACATGGGCAGCATGCATCCCGTACAGGTGATCGCGGTGACCGGCGGCAAAGGTGGCGTCGGGAAGACTAACGTGTCAGTGAACTTG TCCCTGGCTCTGGCAGAGCTTGGCCGACGGGTCATGCTGCTGGACGCCGACCTGGGCCTGGCGAACGTCGACGTGTTGTTGGGGCTTACACCCAAACGCA CCCTGGCGGACGTGATTGAAGGGCGCTGTGAGCTGCGTGACGTGTTGTTGCAGGGGCCGGGCGGGATTCGCATCGTGCCGGCTGCCTCCGGCACCCAGAG CATGGTTCACCTGACCCCGGCCCAACACGCGGGCCTGATCCAGGCGTTCAGCGACATCGGCGACAACCTCGATGTGCTGGTGATCGATACCGCGGCCGGT
|
|
| Amino Acid Sequence |
>protein FlhF
MQVKRFFAADMRQAMKLVRDELGAEAAIIGNRRIAGGVELTAALDYKLSALAPRVPNMELEDELRKTQSRIASAQAELSLRSNEGEGAAGTNRQLFAGQP LTAGLPLTAAEPLIEQAQAEPRRPEPAPAAPARGVDPRALDSMRFELNSLRELMEVQLGSLAWNQLQGSRPAQANLWRRLQRIGLSGPLSRDLLALINGI EEPRQAWRMLLAHLARMISTPEVEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQSIALVSMDSFRIGAQEQLKTLGRILNVSVTHVDPGQSLAQ ALEPLLRKRVVLIDTAGLQASDPALRMQLESLAGRGIKSKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAIGHELPVAYLTDG PRIPDDLHLPRRHQLVSRAVSVQMQEEPSEEAMADMFADIYHSPTKQVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|