Pseudomonas fluorescens F113, PSF113_1144 (fabZ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006633 fatty acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00406
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016836 hydro-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00406
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe00061 Fatty acid biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00780 Biotin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF54637 Thioesterase/thiol ester dehydrase-isomerase IPR029069 HotDog domain superfamily 1 142 2.7E-52
Gene3D G3DSA:3.10.129.10 Hotdog Thioesterase - - 3 146 5.2E-60
CDD cd01288 FabZ - - 11 142 7.01527E-78
NCBIfam TIGR01750 JCVI: 3-hydroxyacyl-ACP dehydratase FabZ IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 8.5E-64
Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 145 35.942829
PANTHER PTHR30272 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ 1 143 9.6E-54
Pfam PF07977 FabA-like domain IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ 11 137 3.6E-39
FunFam G3DSA:3.10.129.10:FF:000001 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ - - 1 146 1.8E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.