Pseudomonas fluorescens F113, PSF113_0239

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GACGGCGAGCGCGACGCCGTGTTCAATATCTATGAATCGCTGTTGAGCGAACCGCCTTCGGACCCTGCAATTACCATCAGTTTGTTGGATAACCCCGCGA TCAAGACCACCGGTACGGTGCGCGAAATCACCCCGGCAGTGTCGGCCCAGACCGGCACCGTGCAGGTCAAGGTCACCCTCAATGATCTGCCCGAAGGCAT GCGCCTGGGCTCGGTGGTCAGTGCCACGGCGAAGTCCGCTGGCAAGACCGCCTTCGAACTGCCTTGGTCGGCCCTGACCAAAAACCTCAGTGACCCGGCC GTTTGGCTGGTGGACGGCGAGGGCAAGGCGCAGTTGCAAACGGTGACGGTCGGCCGCTACCTGACCGGCAAGGTCATCATCAGCGATGGTCTCAAGGGCA GTGAGAAAATCATCATCGCCGGTGGGCAACTGTTGCACCCCGGCGTACGCGTCGAGATCGCTGAAAACACCGCTGGAAAAACCACGCCGGGAGCCCAGCC
DNA Sequence for Gene
>PSF113_0239
ATGAAGCGTTTGTGGATGGTCTCGGCCGGTCTCTTGCTGGCCGCCTGCTCCAAGGAAGAAGCGCCGCCCGAACCGGTGCGTCCGGTGTTGTCCGTTGAAG TCCGGGCTCTCGACCAGCAGGCACTCGGACGGTTTGCCGGCAATATCCAGGCGCGCTATGAGAGCAACGTGGGCTTCCGCGTGCCTGGACGGATCGCCAG CCGCAATGTCGATGTCGGTGCGCAAGTGAAGAAGGGCGACCTGCTCGCCACGCTCGACCCTACCGACCAGCAAAACCAGTTGCGCGCCGCCCAGGGCGAT CTGGCGCGGATCGAGGCGCAGTACATCAATGCCCAGGCCAATGCCCGTCGCCAGCAGCAATTGTTCGACCGTGGCGTCGGCGCCCAGGCGCAACTGGACA TCGCCCAGACCGACCTGAAAACCACTGGGGCATCTCTCGAACAGGCCAAGGCCTCGGTGGAGCAGGCCCGCGACCAGCTCAACTACAGCCAACTGCACAC TGACCACGACGCCGTCGTCACCGCCTGGAATGCCGAAGCCGGGCAGGTGGTCACCGCCGGCCAGCAAGTGGTGACCCTGGCCCGCCCGGACATCAAGGAA GCAGTGATCGACCTGCCGGCCGGGCTGGTCGAGCGCCTGCCCGCGGACGTGGTGTTCGAGGTCGCCGCGCAATTGGACCCGAACATCCACACCACCGCCA TCGTGCGCGAGATCGAACCCCAGGCCCAGAGCGCGACCCGCACCCGCCGCGCGCGCCTGACACTGACCGACACACCGCCAGGTTTTCGCCTGGGCACGGC CATCAGCGTGACCCTGAGCTCGACCATCGAACCGCGCATCGAGCTGCCACTGAGCGCGCTGCAGGAGATCGACGGCAAGGCGCGGATCTGGCTGGTCGAC CCGCACAGTCAGACCGTCTCGCCCCGTGACGTGCGGATTCTCGAACGTTTGGCCAACTCGGTGCTGGTGTCCAACGGCATCAAGGCTGGCGATCGCGTGG TCAGCGCTGGGGTGAACAGTCTCCAGCCGGGGCAGAAAGTGAAACTCGACGAGGACGCACGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGGGCCTTTCAACCTATCCGAATGGGCCCTGCGGCATCAGTCGTTTGTCTGGTACCTGATGTTCGTTGCGTTGTTGATGGGCGTGTTTTCGTACATGAA CCTGGGGCGCGAAGAAGACCCGTCGTTCACCATCAAGACCATGGTCATCCAGACCCGTTGGCCTGGTGCGACCCAGGAAGAAACCCTCAAGCAGGTCACC GACCGCATCGAGAAGAAACTCGAAGAGCTCGATTCCCTCGACTATGTAAAAAGCTACACCCGACCAGGAGAGTCGACGGTGTTCGTGTACCTGCGCGATA CCACCGGGGCCAAGGAAATCCCCGAGATCTGGTACCAGGTGCGCAAGAAGATCAACGACATTCGCGGCGACTTTCCTGATGGCTTGCAAGGGCCTGGCTT CAACGATGAGTTCGGCGATGTCTACGGTTCGGTGTACGCCTTTACCGGCGACGGTCTGTCGATGCGCCAGTTGCGCGACTACGTGGAACAGGTGCGCGCC
Amino Acid Sequence
>Efflux membrane fusion protein, RND family
MKRLWMVSAGLLLAACSKEEAPPEPVRPVLSVEVRALDQQALGRFAGNIQARYESNVGFRVPGRIASRNVDVGAQVKKGDLLATLDPTDQQNQLRAAQGD LARIEAQYINAQANARRQQQLFDRGVGAQAQLDIAQTDLKTTGASLEQAKASVEQARDQLNYSQLHTDHDAVVTAWNAEAGQVVTAGQQVVTLARPDIKE AVIDLPAGLVERLPADVVFEVAAQLDPNIHTTAIVREIEPQAQSATRTRRARLTLTDTPPGFRLGTAISVTLSSTIEPRIELPLSALQEIDGKARIWLVD PHSQTVSPRDVRILERLANSVLVSNGIKAGDRVVSAGVNSLQPGQKVKLDEDAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site