Pseudomonas fluorescens F113, PSF113_0238

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AAAACGCTGAAAGACTGGGTTCCGGCAAGCCCAGGGCGATCGAATAGCTGAAGTCTTCACCGGCGAAGCCCAGGCGCAGGCGCTTGGTGCCCTGGCGCAC AACCGCCTGGACCGGCACCTCGCCGTTACGCATGCGGCGGCTGATTTCTTCCGGCCCGGCCCAGAAAGTCGAGTCCAGTCCGCCCTCGCGGGCCAGGGCG TTGACCACCCCGCCTTGTGCTGTCTCGGCCAACAGGCGCAGGGCGCGGTACAGATTGGACTTGCCGCTGCCGTTGGGACCGGTGATCAGGTTCAGCCGGC CCAGGGGGATTACCAGCTTGTTGATGGAGCGGTAATTGGCCACCGCCAGGGTCTTGAGCATGAGCAGACTCCTGCTGCTGGGGGTCCATAAGGAGGCGAT CAGTTTGCCTGATTTGCGCTCCTGTTGTATTCGTTGAACCCTGTTCTAAGCTCACAGTCGTATCGTCACTGGTACGTCCGTACAGCGCAAAGGAGTCTGC
DNA Sequence for Gene
>PSF113_0238
ATGGCTGGTCCCCGAATCAAACTGGTAGTTGGCCTGGGCCTCTGTGCGCTGCTGGCCGGATGCGGTGATGACAAGCCTGCGGAAAAAGCCCTGCCACGGG TTTTTGTGCAGCAAGCCGTGCCCAGCGAATATGCCGCCTCGGTGACCCTGACTGGCGATGTCCAGGCGCGGGTGCAGGCCGACCTGTCGTTTCGTGTAGG CGGCAAGATCATCGAGCGCAAGGTCGATGTCGGTGACCGGGTTTCGGCCCGGCAAGTACTGGCCCGGCTCGATCCCCGGGACCTGCAGACCAACGTCGAC TCTACCGAGGCCCAGGTGGCCGCCGAGCAGGCGCGGGTCAAGCAGAGTGCGGCGGCGTTCGTGCGCCAGCAGAAACTCCTGCCCAAGGGCTATACCAGCC AAAGTGAATACGACGCGGCCCAGGCCCAACTGCGCAGCAGCCAGAGTGCATTGAGCGCCGCCCAGGCCCAACTGGCCAACGCCCGCGAACAACTGAGCTA CACCGCATTGATTGCCGAGGCACCGGGCATCATCACCGCGCGCCAGGCTGAAGTCGGCCAGGTGGTGCAGGCCACGGAGCCGATCTTCAGCCTGGCCCGG GACGGCGAGCGCGACGCCGTGTTCAATATCTATGAATCGCTGTTGAGCGAACCGCCTTCGGACCCTGCAATTACCATCAGTTTGTTGGATAACCCCGCGA TCAAGACCACCGGTACGGTGCGCGAAATCACCCCGGCAGTGTCGGCCCAGACCGGCACCGTGCAGGTCAAGGTCACCCTCAATGATCTGCCCGAAGGCAT GCGCCTGGGCTCGGTGGTCAGTGCCACGGCGAAGTCCGCTGGCAAGACCGCCTTCGAACTGCCTTGGTCGGCCCTGACCAAAAACCTCAGTGACCCGGCC GTTTGGCTGGTGGACGGCGAGGGCAAGGCGCAGTTGCAAACGGTGACGGTCGGCCGCTACCTGACCGGCAAGGTCATCATCAGCGATGGTCTCAAGGGCA GTGAGAAAATCATCATCGCCGGTGGGCAACTGTTGCACCCCGGCGTACGCGTCGAGATCGCTGAAAACACCGCTGGAAAAACCACGCCGGGAGCCCAGCC ATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGTTTGTGGATGGTCTCGGCCGGTCTCTTGCTGGCCGCCTGCTCCAAGGAAGAAGCGCCGCCCGAACCGGTGCGTCCGGTGTTGTCCGTTGAAGTCCG GGCTCTCGACCAGCAGGCACTCGGACGGTTTGCCGGCAATATCCAGGCGCGCTATGAGAGCAACGTGGGCTTCCGCGTGCCTGGACGGATCGCCAGCCGC AATGTCGATGTCGGTGCGCAAGTGAAGAAGGGCGACCTGCTCGCCACGCTCGACCCTACCGACCAGCAAAACCAGTTGCGCGCCGCCCAGGGCGATCTGG CGCGGATCGAGGCGCAGTACATCAATGCCCAGGCCAATGCCCGTCGCCAGCAGCAATTGTTCGACCGTGGCGTCGGCGCCCAGGCGCAACTGGACATCGC CCAGACCGACCTGAAAACCACTGGGGCATCTCTCGAACAGGCCAAGGCCTCGGTGGAGCAGGCCCGCGACCAGCTCAACTACAGCCAACTGCACACTGAC
Amino Acid Sequence
>Efflux transporter, RND family, MFP subunit
MAGPRIKLVVGLGLCALLAGCGDDKPAEKALPRVFVQQAVPSEYAASVTLTGDVQARVQADLSFRVGGKIIERKVDVGDRVSARQVLARLDPRDLQTNVD STEAQVAAEQARVKQSAAAFVRQQKLLPKGYTSQSEYDAAQAQLRSSQSALSAAQAQLANAREQLSYTALIAEAPGIITARQAEVGQVVQATEPIFSLAR DGERDAVFNIYESLLSEPPSDPAITISLLDNPAIKTTGTVREITPAVSAQTGTVQVKVTLNDLPEGMRLGSVVSATAKSAGKTAFELPWSALTKNLSDPA VWLVDGEGKAQLQTVTVGRYLTGKVIISDGLKGSEKIIIAGGQLLHPGVRVEIAENTAGKTTPGAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site