Pseudomonas fluorescens Pf0-1, Pfl01_5584

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00300	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfo02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfo03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	623	641	2.1E-34
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	619	769	8.8E-10
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	619	784	2.3E-43
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	795	862	1.1E-9
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	697	715	2.1E-34
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	204	349	1.9E-10
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	668	686	2.1E-34
CDD	cd00009	AAA	-	-	189	340	7.90855E-16
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	166	493	8.9E-72
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	17	122	6.87E-11
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	587	788	2.02206E-80
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	349	566	6.2E-45
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	730	744	2.1E-34
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	790	880	3.1E-6
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, repeat (R) domain	26	73	3.1E-4
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	349	441	4.1E-28
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	209	340	2.7E-10
Gene3D	G3DSA:1.10.8.60	-	-	-	793	883	8.7E-9
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	155	348	1.9E-85
Coils	Coil	Coil	-	-	418	438	-
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	18	873	0.0
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	155	348	5.9E-72
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	568	856	9.31E-56
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	572	788	2.8E-66
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	873	0.0
Coils	Coil	Coil	-	-	443	494	-
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	572	788	2.4E-82
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	5	152	2.9E-25
Coils	Coil	Coil	-	-	525	545	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.