Pseudomonas fluorescens Pf0-1, Pfl01_5304
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGTGATGCCGGGCGCGGTTTCGCGGTTGTGGCCGACGAAGTACAGCGGCTGGCCGAGCGTTCGTCCGCCGCGACCCGGCAGATCGAGACGCTGGTGC GGGCGATCCAGACCGACACCAACGAAGCCGTGATTTCCATGGAGCAGACCACCACCGAAGTGGTGCGCGGCGCGCGGCTGGCGCAGGATGCGGGTGTGGC CCTGGAAGAAATCGAAGGCGTGTCCAAGACCCTCGCGGCGCTGATCCAGAGCATTTCCAACGCGGCGCAGCAGCAGACGTCTTCGGCCGGGCAGATTTCC CTGACGATGAACGTGATCCAGCAGATCACCTCGCAGACCTCGTCCGGTTCCACGGCCACCGCCGAGAGCATCGGCAACCTGGCGAAAATGGCCAGCCAGT TGCGTCGCTCGGTGTCCGGGTTCACCTTGCCGACGACGCCTGCGCCCGTCGCGGACAAGGCGTGAGGCCTGCGGGCGAGTTCATGTCGAGCGGAGTGGTT
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| DNA Sequence for Gene |
>Pfl01_5304
ATGGGTGACCGGCACGACTACGTGGCCCTCGAATGGGTCAAGGGTGAAATCGCCGAGACGCTGAGGCAGGCGCATCAGGCCATCGAAGCCGTGCTCGACG ATCCGCAGTCGGTGCCGGGACTGGGCGAGTGCCTGGCCTGCATCCATCAGGTGCACGGCAGCCTGCAGATGGTCGAGTTCTACGGCGCGGCGCTGCTGGC CGAAGAGATGGAACACCTGGTCGAAGCGTTGCAGAACGACCGCGTCAGCCATCGTGACGAAGCGCTGCACTTGTTGCTGCAGGCGCTGGGCCAATTGCCG ATCTACCTCGACCGCGTGCAGGGCGCCCGCCGTGACCTGCCGCTGGTGGTGCTGCCGCTGATCAACGACTTGCGCAGTGCCAGAGGCGAAAGCCGGTTGT CGGAAACCAGCCTGTTCAGCCCGCAGTTGCCCGAACTGGCGCCGTTGGGCGAGGAAACTCTGGCACTGTTGGAGCCGGCGGAGCTGCCGAACGTGCTGCG CAAATTGCGCCAGATGCTGCAAATGGCGCTGGTCGGACTGCTCCGCGAGCAGGATGACCAGACGCATCTCGCTTATCTGGCCAAAGTCTTTACCCGGCTT GAAGCAATCAGCGGTAACTCGCCGCTGAGCCCGTTGTGGCAGGTCGCCTCGGCGCTGGTCGAGGGCATGCGCGAAGGGCGAATCGCCAACAGCCCGGCCC TGCGCAGCCTGTTCAAGGACGCCGACAAGGAACTCAAGCGCCTGCTCGAACAGGGCATGCCCGGCCTCAACCAGCCGCCACCGCCTGAACTGCTGAAAAG CCTGCTGTTTTATATCGCCAAAGCCGAACATCCCACCGGGCAGATGCTGACCATGAAAGATCGCTACTCCCTGGACGACGCGCTGCCCGACAGCGCGATG GTCGACGAAGAACGCGCGCGCCTGGCCGGCCCTGACCGCGATGCCATGCGCTCGGTGCTCGCGGCGCTGTGCGAAGAACTGGTGCGGGTCAAGGAACGCC TCGACCTGTTCGTGCGCAGCGACCGTCAGCACGCCTCGGATCTGGACAGCCTGCTGGCGCCACTGCGGCAGATCGCCGACACCCTGGCGGTGCTCGGTTT CGGCCAGCCGCGCAAGGTGATCATCGATCAACTGGCGGTGGTGCTCAGCCTCGCGCAAGGCCAGCGCGAACCGAACGACGCCACGCTGATGGACGTCGCC GGTGCCTTGCTTTACGTCGAAGCGACGCTGGCCGGAATGGTCGGCACGGTGGAACCGGAGAGCCCGGAAGACTCGCGCCTGCCAACCACCGACCTGACGC AGATCCATCAGATCGTGATCAAGGAAGCACGTATCTGTCTGCAACAGGCCAAGGACATGATCGTCGATTACATCGACGCCGACTGGGATCGCCAGCAACT GCAAAGCCTGCCGGCGCTGCTGACCCAGGTGCGCGGCGCGCTGGCGATGATTCCGCTGGCACGCGCGGCCAGCCTGCTCGAAGCCTGCAATGGATTTATC CGCGAGCATCTGTTGCTCGACCCTCACGAGCCGGGCTGGCAGCAACTCGACAGCCTCGCCGACGCCATCACCAGCCTCGAGTACTACCTCGAGCGCCTGA GCGGCGACCCGCAGGCACCCAGCGAGCACTTGCTGGATATCGCGCAGAAAAGCCTCGCCAGTCTCGGTTTCTTTCCTGATGAAGAGCCCGGCGAGCCGCA TGTGCCGGTGCTCGATGATGTGCTCAGCCCCAGCGAAGCGCTGGTGATGCAGGATTTGCAGGAGCTGGACGACCCGCAGATCGTGCAGTCGTTGGCCGAA GTGCTGGCCAGTCCGGTGTCAGCGGTCAACCCGCCGGCGCAGACCACGCCGGGCAGCCTGCTGCCGCCACCGGCCGATGAAGAACCGGTGGACGACGAGC TGCGTGAAGTGTTCCTGGAAGAGACCGGTGAAGTGCTCGAGGTGCTGAGCGAATACCTGCCGCGCTGGTCTGCCGAGCCTGATGACCGCGCCGCCCTCAG TGAGCTGCGCCGCGCCTTCCACACCCTCAAGGGCAGCGGCCGGATGGTGCGGGCGTTGGTCCTCGGCGAGCTGGCCTGGGCGGTGGAAAACCTGCTCAAC CGTGTGCTGGAAAACAGTGTCGAGCCCGGCCCGGCGGTGCGCCAGTTGCTGGCCGACACACTGCTGTTGTTGCCGGACCTGATCGCCGAATTCGCCACCA ATGGCCAGCGTCAGCGCCACGATGTCGATCAACTGGCGGCCCGCGCCCATGCGCTGGCCAAGGGCGACACACCGCTGCCTGCCGAAGACGTGGAAGACGT CGCGGCCCTCGATCCGCTGTTGCTGGAGATTTTCCGCAACGAAGCCGAAACCCACCTCGCCAGCCTCAATCGTTTTCTCGATCAGGCTGCCGAGCATGTG CCGTTGCAGGCCAGCGACGAGTTGCAGCGAGCCCTGCACACCCTCAAGGGCAGCGCCTCGATGGCGGGGGTGTCACCGATTGCCGAACTGGCGGCGCCGC TGGATAAACTGGCCCGGGAATTCAAGGCCCATCAACTGGCGCTGGACCTGGATGAAGTGGAACTGCTGCTCGAAGCCGAGGGCCTGTTCCGTGTCGGTCT GCGTCAGCTCAAACACGATCCACTGGCGCCGATTGTCGGTGCGCAGTCACTGATCAAACGCACCGAAACCCTGCTCGGCGAGCGTCTGGAATCGATCCTC AATGCCCCGAGCAGTGCGGTGCGGGTCAAGCGCGATCCGCAACTGATCAACAACTTCCTGGCCCAGGGCATGGACATCCTGCTCGACGCCGAAAACCTCT TGCAGCGCTGGCAGCAGCACCCCGGCGAACGTCAGGAACTCAGCGCGCTGCTGGATGAGCTGACTACCCTGGGCGAAGCCGCACACCTGGCGGATCTGCT GCCGGTGGATGTGCTGTGTGAAGCCTTGCTCGATCTGTACGGCGCGGTCGAAGAAAGCAGCCTGGCGGTCAGCGAGCGGTTTTTCCATGAAGCGCAGCAG GCCCACGAAGCGCTGATCAACATGCTCGACGAACTGGCCGCCGGCCAGGAAATCACCCCGCAACCGCAGCGCATCCGAGCCTTGCACGAACTGCTCGACG AGAGCCTCGATCCGTCCTCCATGGGCCTGATCCGCAGCGACGGCAGCCGCACCCTGAGCATCCGTGAACTGGGCAGCGCCACCGCCGAACTGCAACAACA CAGCGCCGACAGCGGGCCGGACGACGAGATCGTCGAGATCTTTCTAGAAGAGGCGGTGGACATTCTCGACAGCGCCGGCCAAGCCTTGCAGCGCTGGCTG AAGGATCCGGAAAACGGTGCACCGCTGTCGTCGCTGCAACGGGATTTGCACACGCTCAAGGGCGGCGCACGGATGGCCGAGGTGACAGCCGTCGGCGATC TGGCCCATGAGCTGGAAGGCCTGTACGAAGGGCTGGTGGATCGTCGTTACAGCCACAGCGAAGCTCTGGATCGATTGCTGCGTCAGAGCCACGAGCGTCT GGCGCAGTTCCTCGAACAGTTGCACCGGCACCAGCCGCTGGATCCGGCGCAGGACCTGATCGAGGCGATCCGCCGCTTTCGCCAGGGCCCGAGCGCCAGT CCCGAAACACCGACAGCTTCCGTCACGCAGGACGGCCCCGGACACGATCCGGAGCTGCTGGAAATCTTCCTCGAAGAAGGTTTCGACATCATCGAAAACT CCGGCGCCGCGCTGCTGCGCTGGCAGGCCGAGCCCGGCAATCGCCAGGAAGTGGAAACCCTGCTGCGCGACCTGCACACCCTCAAGGGCGGCGCGCGGAT GGTGGAAATCGGCCCGATCGGCGACCTCGCCCACGAGCTGGAATACCTTTACGAAAGCCTGTCTGCCGGCACCCTGCAGGGCAGCGCCGAACTGTTCGCG CTGTTGCAGCGCGGCCAGGACCGCTTGGCGCAGATGCTCGACGCTGTGCGCGCCGGCCAGCCGTGCCCACCGGCAGACCGGTTGATCAGTGCGATCCAGA ATTTCAGCCATCCGCTGGTCGTGCAAACTCCGGCGCCCGTGCCGTCGGTGGCGGTCAAGGTCGAGCCTGCTGCCCCGGCGCCCGAGGCCGGGGCAGACAT GGTCAAGGTCTCCGCCGAGTTGCTGGATGACCTGGTCAATCTCGCCGGCGAAACCTCGATTTTCCGTGGGCGCATCGAGCAGCAGGTCAGCGATGCGCAG ACCGCCCTGCACGAGATGGAAACCACCATCGAGCGGATGCGCGACCAGTTGCGCCGGCTCGACACCGAAACTCAGGGGCGGATCCTCAGCCGTCAGCAAG TGGACGCCGAACGCCTCGGCTACGAAGATTTCGACCCGCTGGAAATGGACCGCCATTCGCAGTTGCAACAGCTGTCACGGGCGCTGTTCGAGTCCGCTTC CGACTTGCTGGATCTGAAGGAAACCCTCGACCGGCGCACTCACGACGCCGAGAACCTGTTGCAGCAGCAGGGGCGGATCAACACCGAATTGCAGGAAGGC CTGATGCGCACGCGCATGGTGCCGTTCGAGCGCATGTTGCCGCGTCTGAAACGTATCGTCCGGCAGGTCGCCGAAGAGTTGGGCAAGGACGTCGCGTTCA GCGTCGGCAACGCCGAAGGCGAGATGGACCGCAACGTCCTCGAACGCATGGCCGCACCGCTGGAGCACATGCTGCGCAACGCCGTCGACCATGGTCTGGA GTCCGCCGAAGTCCGGCTGGCGGCGGGCAAACCGGCGCAGGGGCAGATCAGCCTCGACCTGTCCCGCGAGGGCGGCGATATTGTGTTCGACATCCGCGAC GATGGCGCCGGCGTGCCGCTGGACGCCGTGCGGCACAAAGCGATCAAGCGCGGTCTGCTGGCGCCGGACGCCGAGATCAGCGACCGCGAGGTGTTGCAGT TCATCCTCCAGCCAGGCTTTTCCACGGCCGAGAAAATCACCCAGATTTCCGGGCGCGGCGTGGGCATGGACGTGGTGCACGAAGAAGTCCGGCAACTGGG CGGAACCATGAGCATCGACTCGGTGCCGGGGCAGGGCGTGCACTTCCGCATTCGCCTGCCGTTCACCGTGTCGGTCAACCGTGCGCTGATGGTGCAGTGT GGTGAGGATCAGTATGCGATTCCGTTGAACACCATCGACGGCATCGTCCGCGTGCTGCCGAATGAGCTGGACGGGCATTTCCGACTCGATCCGCCGAGTT ATCAATACGGCGGCCAGCGTTATGAGCTGTGTTACCTGGGCGAGCTGCTGAAAACCGCGCCACGACCAAAACTGTCCGGCCAGAGCCTGCCGGTGCCGGT CTTGCTGGTGCAGTGCAACGACCGGCACATCGCGGTGCAGGTCGACACGATGGCCGGCACCCGCGAAATCGTGGTCAAGAGTCTCGGCCCGCAGTTCGCA TCGGTGCAGGGCGTGTCCGGGGCGACGATTCTCGGCGATGGCCGGGTGGTGCTGATTCTCGACCTGCTGGCGCCGATCCGTGCGATGCAGGCGCGGTTGC CGCAGCGTCCGACCAGTCACGAAATCGAGAGCGAACCACAGAAGCCGTTGCTGGTGATGGTGGTCGACGACTCGGTCACGGTGCGCAAGGTCACCAGCCG CCTGCTCGAACGCCACGGCATGAACGTGCTGACCGCCAAGGACGGGGTCGATGCGATGTTGCTGCTGGAAGAACACATGCCGGACCTGATGCTGCTAGAC ATCGAAATGCCGCGCATGGACGGCTTCGAAGTGGCGACCCAGGTACGCCACGACGAACGCCTGCAACACCTGCCGATCATCATGATCACCTCGCGCACCG GCCAGAAACACCGCGACCGCGCGATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCGTACCAGGAATCGGTGCTGCTCGAAAGCATCGCCCTGTGGAG CAAAAAACATGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCAGCACAGTCAACGCGCCAGTCAGCTCACCGGGCTGCTGCTGCCGCTGGCGGATCGCAACCTGATCCTGCCCAACGTCGCCGTCGCCGAGCTGATC GACTACCAGTCGAGCGCCTTCGATCTCGATACACCGCCGTGGTATCTCGGTCGGGTGACCTGGCGCGAGCGGCAGATTCCGCTGCTGAGTTTCGAGTCGG CGTGCGGCAACAAGATCGTCATTGGCGAACGGGCGCGGATCGTCATCCTCAATGCCCTCGGCGGGCGGCCGGAGTTGAAGTTCATCGCGCTGCTGGTGCA GGGGATTCCGCGCTCGTACAAGCTCGACAGCCAGTTGAGTTATGTCGACGTGCCGCTGTGTGCGCTGGAGCAGGCGGCGGTGCAGGTCGGGGAGCAGGTG GCGAAGGTGCCGGATTTGTTGGCATTGGAGACGTTGTTGGTGGATGCGGGGCTGGTTTGAGTTCGCTTGAATTTTGAGTTGCCCCGTTTCCCCCTCACCC
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| Amino Acid Sequence |
>CheA Signal transduction histidine kinase (STHK)
MGDRHDYVALEWVKGEIAETLRQAHQAIEAVLDDPQSVPGLGECLACIHQVHGSLQMVEFYGAALLAEEMEHLVEALQNDRVSHRDEALHLLLQALGQLP IYLDRVQGARRDLPLVVLPLINDLRSARGESRLSETSLFSPQLPELAPLGEETLALLEPAELPNVLRKLRQMLQMALVGLLREQDDQTHLAYLAKVFTRL EAISGNSPLSPLWQVASALVEGMREGRIANSPALRSLFKDADKELKRLLEQGMPGLNQPPPPELLKSLLFYIAKAEHPTGQMLTMKDRYSLDDALPDSAM VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASDLDSLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQREPNDATLMDVA GALLYVEATLAGMVGTVEPESPEDSRLPTTDLTQIHQIVIKEARICLQQAKDMIVDYIDADWDRQQLQSLPALLTQVRGALAMIPLARAASLLEACNGFI REHLLLDPHEPGWQQLDSLADAITSLEYYLERLSGDPQAPSEHLLDIAQKSLASLGFFPDEEPGEPHVPVLDDVLSPSEALVMQDLQELDDPQIVQSLAE VLASPVSAVNPPAQTTPGSLLPPPADEEPVDDELREVFLEETGEVLEVLSEYLPRWSAEPDDRAALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLN RVLENSVEPGPAVRQLLADTLLLLPDLIAEFATNGQRQRHDVDQLAARAHALAKGDTPLPAEDVEDVAALDPLLLEIFRNEAETHLASLNRFLDQAAEHV PLQASDELQRALHTLKGSASMAGVSPIAELAAPLDKLAREFKAHQLALDLDEVELLLEAEGLFRVGLRQLKHDPLAPIVGAQSLIKRTETLLGERLESIL NAPSSAVRVKRDPQLINNFLAQGMDILLDAENLLQRWQQHPGERQELSALLDELTTLGEAAHLADLLPVDVLCEALLDLYGAVEESSLAVSERFFHEAQQ AHEALINMLDELAAGQEITPQPQRIRALHELLDESLDPSSMGLIRSDGSRTLSIRELGSATAELQQHSADSGPDDEIVEIFLEEAVDILDSAGQALQRWL KDPENGAPLSSLQRDLHTLKGGARMAEVTAVGDLAHELEGLYEGLVDRRYSHSEALDRLLRQSHERLAQFLEQLHRHQPLDPAQDLIEAIRRFRQGPSAS PETPTASVTQDGPGHDPELLEIFLEEGFDIIENSGAALLRWQAEPGNRQEVETLLRDLHTLKGGARMVEIGPIGDLAHELEYLYESLSAGTLQGSAELFA LLQRGQDRLAQMLDAVRAGQPCPPADRLISAIQNFSHPLVVQTPAPVPSVAVKVEPAAPAPEAGADMVKVSAELLDDLVNLAGETSIFRGRIEQQVSDAQ TALHEMETTIERMRDQLRRLDTETQGRILSRQQVDAERLGYEDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRTHDAENLLQQQGRINTELQEG LMRTRMVPFERMLPRLKRIVRQVAEELGKDVAFSVGNAEGEMDRNVLERMAAPLEHMLRNAVDHGLESAEVRLAAGKPAQGQISLDLSREGGDIVFDIRD DGAGVPLDAVRHKAIKRGLLAPDAEISDREVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGTMSIDSVPGQGVHFRIRLPFTVSVNRALMVQC GEDQYAIPLNTIDGIVRVLPNELDGHFRLDPPSYQYGGQRYELCYLGELLKTAPRPKLSGQSLPVPVLLVQCNDRHIAVQVDTMAGTREIVVKSLGPQFA SVQGVSGATILGDGRVVLILDLLAPIRAMQARLPQRPTSHEIESEPQKPLLVMVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMLLLEEHMPDLMLLD IEMPRMDGFEVATQVRHDERLQHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIALWSKKHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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