Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCCCACCCGCTGCAAGCGCTGGTGTCCGAGCCGATCAAACCGATCATCGACAGCGTGATCATGTCCAACGCCGTGCACGGTTACATCAGCCAGTCCGACA AGGGCGACCTGGTGATCGGCGCCGGTATCGACGGCTACAACGGCTACGGCCAGCGCGGTTCGTACCCGGTGATCGAGCACACCATCCAGGCCATCGTCGA GATGTTCCCGGTGCTGTCGCGAGTGCGCATGAACCGTCAGTGGGGCGGCATCGTCGACACCACGCCGGACGCCTGCCCGATCATTTCGAAAACCCCGGTA CCGAACATGTTCTTCAACTGCGGTTGGGGCACCGGTGGCTTCAAGGCGACACCTGGCTCGGGCAACGTGTTTGCCGCAAGCCTGGCCAAGGGTGAAATGC ACCCGCTGGCCGCACCTTTCTCCATCGACCGTTTCCACAACGGTGCGTTGATCGACGAACACGGCGCTGCGGCTGTCGCCCACTAACAGGAGAAATCCCC
|
|
DNA Sequence for Gene |
>Pfl01_5206
ATGTTGCATATCTTCTGTCCTCACTGCGGCGAACTGCGCTCCGAAGAGGAATTCCACGCATCCGGCCAGGCGCACATTCCGCGTCCGCTGGATCCGAACA GCTGCACCGACGAGGAGTGGGGCGACTACATGTTCTTTCGCGACAACCCGCGCGGTCTGCACCACGAGTTGTGGGATCACGTCGCCGGTTGCCGCCAGTA CTTCAACGTCACCCGCGACACCGTGACCTACGAGATTCTCGAAACCTACAAGATCGGCACCAAGCCGCAATTCACCGACAAGGCTGACACTGCGAAAACA GCCACGACGGCGCTGGGAGAGAAGGTATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCAGACCAATCGCCTGTCCAACGGTGGACGGATCGACCGCAACAAAGTGCTGAGCTTCACCTTCAATGGCCAGACCTACAAAGGGTTTGAAGGCGACTC GCTGGCCGCCGCCCTGCTGGCCAACGGCGTCGACATCATTGGCCGCAGCTTCAAGTATTCGCGTCCGCGCGGCATCTTCGCCGCCGGCGCCGAAGAGCCG AACGCGGTGTTGCAGATCGGTGCGACCGAAGCCACCCAGATCCCTAACGTGCGCGCCACGCAACAAGCGCTGTACCAAGGCCTGGTCGCCACCAGCACCA ACGGCTGGCCGAGCGTCAACAACGACATGATGGGGATTCTCGGCAAGGTCGGCGGCAAGCTGATGCCGCCGGGTTTCTACTACAAAACCTTCATGTACCC GCAATCGTTCTGGATGACTTACGAGAAATACATTCGTAAGGCTGCCGGTCTTGGCCGCTCGCCGACCGAGAACGATCCGGACACCTACGATTACATGAAC
|
|
Amino Acid Sequence |
>sarcosine oxidase subunit delta, heterotetrameric
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNSCTDEEWGDYMFFRDNPRGLHHELWDHVAGCRQYFNVTRDTVTYEILETYKIGTKPQFTDKADTAKT ATTALGEKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|