Pseudomonas fluorescens Pf0-1, Pfl01_4239
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATGAGTGGCCTCGACCTGATCCGCCAGCTGCGCTCGGGCGGCAAGACGTTTCCGATCCTGATCCTCACCGCGCGCGGCAACTGGCAAGACAAGGTCGAAG GTCTGGCAGCCGGGGCTGACGATTATCTGGTCAAGCCGTTCCAGTTCGAAGAGCTTGAAGCGCGACTCAATGCCTTGCTGCGCCGCTCCAGCGGTTTCAC CCAGTCGACCATTGTCGCCGGCCCGCTGTTGCTCGACCTCAATCGCAAGCAGGCGACCCTCGACGAGCAACCGCTGGCGCTGACCGCCTACGAATACCGG ATTCTCGAATACCTCATGCGTCATCACCAGCAAGTGGTGCCCAAGGATCGGCTGATGGAGCAGCTGTACCCGGATGACGACGAGCGCGATCCGAACGTGA TCGAAGTGCTGGTCGGCCGTCTGCGCCGCAAGCTCGAAGGCCCGGCCGGATTCAAGCCGATCGACACCGTGCGCGGCCTCGGTTACCTGTTCAATGAGCG
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| DNA Sequence for Gene |
>Pfl01_4239
TTGCACTTGATCCGTTCCCTTCGCGTCCGGCTGATGCTCGCCGCCACCACCCTGGCGGTGTTGTTCATGCTCGCCTTGCTCCCGGCGATGCAGGGCGCTT TCAGCCTGGCGCTGCAGGACTCGATCGAGCAACGGCTGGCGTCCGATGTCACCACGCTGATCTCCGCCGCACGGGTTGAAAACAACCGCTTGATGATGCC GGCACAGTTGCCCGACGAGCGCTTCAACCTCACGGACAATCGCCTGCTCGGCTACATCTATGACCGCGAAGGGCACCTGGTCTGGCGCTCGAAGGGCACC CAGGAAGAGAAGATCAACTACACGCCGCGTTACGACGGCCTCGGCAACGAGTTCGCGCGGATCCGCGAAGCCAACGGTCAGGAATTCTTCGTCTACGACG TTGAAGTCAAACTGCTCGGCGGCAAGAGCGCGGCCTTCAGTATCGTGGCCCTGCAACCGGTGCGCGAATACGAAACCACCCTTGAAGGCCTGCGGGAAAA TCTCTACCTCGGTTTTGGCGCAGCGTTGCTGGTGCTGCTCGCACTGCTGTGGATCGGCCTGACCTGGGGCCTGAAAGCCTTGCGCCGGCTCAGTCAGGAA CTCGACGAGATCGAAGGCGGAACCCTCGAAAGCCTCAGCGAACAACACCCGCGCGAACTGTTGCGCCTGACCGGTTCCCTCAACCGCCTGCTGCACAGCG AACGCCAGCAGCGCAGCCGTTACCGCGATTCTCTCGACGATCTGGCCCACAGCCTGAAAACCCCGCTGGCGGTACTGCAAGGCGTCAGCGAAGACATGGC TCAACGCCCCGAAGACCGCGATCAGGCCTGGGTGCTGCAAACCCAGATCGAACGCATGAGCCAGCAGATCGGCTACCAGTTGCAACGCGCCAGCCTGCGC AAAAGTGGCCTGGTGCGCCATCAGGTGCGCCTGCGTCCGGTGCTGCAAAGCCTGTGCGACACCCTCGACAAGGTCTACCGCGACAAACATGTGCGCGTCG CCTTCGATCTGCCGGAGCACTGTTACGTGCCGATCGAGCAGGGCGCCTTGCTGGAGATGATGGGCAACCTGCTGGAAAACGCCTATCGCCTGTGCCTGGG CGAAGTACGCATCAGCGTGCGTGAAAGTCTGGACGGAATCGAACTGTGCATCGAAGACGACGGCCCCGGCGTACCACCGGATCAGCGCGCACGGATTCTC GAACGCGGCGAACGCCTGGACCGCCAGCACCCGGGGCAGGGCATCGGGCTGGCGGTGGTCAAGGACATCATCGAGAGCTACAGCGCGAAATTGACGCTGG GGGATTCACCGATGGGTGGGGCGGCGTTCAGGATTCATTTCCCGGCTGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCGAGTCTCTTTCAGGTGGCGCCGGGGTTATGGCCATTCATCGCCACTGTCAGATCTGACAGTGGTTCATTCCGCGTATTTCCAACACTCTGTTTTTG TCCATCATGGGATCGAGCCGTGATGCTTTCGGAACAGGGAGACTGGAAATGGTTGCGTTCATCACTGCTCAAGAACAGAAAAAAATTGTTCAGGCGAAGC GCCGACGCAGAATTGATCTTCCTGCATCTTCGATTGATGGAGCGGAGAACGGAGTGATTCCCCTTACTGTGTCGAGTAAGGACATGACATTTCGAATTCC TTGTTTTTCAGGACAACAGGTCGGGGCACCTTTGGTTGCTCATGTTCGTACGAGATATTCGTCGTCGGATTGGGCGAAGGTCACAACCATCACGACGGCT GATGAGGATACGACTCTCGTCATACCCGCCAATCGTGCGATTGACCTCAGAGGCCAACCTCTGGAACTCTCCTACGACTATTTATTCATTGATCCTCCCT
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| Amino Acid Sequence |
>periplasmic sensor Signal transduction histidine kinase
MHLIRSLRVRLMLAATTLAVLFMLALLPAMQGAFSLALQDSIEQRLASDVTTLISAARVENNRLMMPAQLPDERFNLTDNRLLGYIYDREGHLVWRSKGT QEEKINYTPRYDGLGNEFARIREANGQEFFVYDVEVKLLGGKSAAFSIVALQPVREYETTLEGLRENLYLGFGAALLVLLALLWIGLTWGLKALRRLSQE LDEIEGGTLESLSEQHPRELLRLTGSLNRLLHSERQQRSRYRDSLDDLAHSLKTPLAVLQGVSEDMAQRPEDRDQAWVLQTQIERMSQQIGYQLQRASLR KSGLVRHQVRLRPVLQSLCDTLDKVYRDKHVRVAFDLPEHCYVPIEQGALLEMMGNLLENAYRLCLGEVRISVRESLDGIELCIEDDGPGVPPDQRARIL ERGERLDRQHPGQGIGLAVVKDIIESYSAKLTLGDSPMGGAAFRIHFPAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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