Pseudomonas fluorescens Pf0-1, Pfl01_4086

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GATATCGCCGCTCAAATGACGAATCAGCGAGGGCTTGCCGATCAGAAAGGATTTGACCGTTTCGATCATTCGTTCATTGATGCTTTTCGCCGTGTACTGT TCAAGGGTCATGGAGGGCGCAGGGGCTGGTGTCGCAAGCTGCGCGGCCTTGAACCTTTTCCGGTCCCGGGCGGTCGGTCGGGGAACCAGGGATTCGATAT CCGGGCCGGCATCCAGACCCAGCGTCTTGCGAGCGCTCGATTCTGCAATTGCCGATGGATCGATTGAAGCTGGAGACGTCGAGGTCATGTCACACTCCTT GTGAAAGCATTCCCGCCAAAAAGGGAGAATGCCTGGAGTGCCCAGTTAATCGGTCCGGCCTGCGAGTGTGGCCGTATATATGTCTATCCGGCTTCTGTTC TGAACTGAGGCGGATCCGTCGCTTGCCGGAACCGGGAAGGCCTCCTAGTCTTGGGGGGATGTTCGCAGGACGATCAGGCAGTGCTCATGCAAGGAATACC
DNA Sequence for Gene
>Pfl01_4086
ATGAAGCAAAAGCGGACTCTCGGAACGCCTCGGTTGTTGGGCATCGTCTGGCCATTCATCGCCGTCGTGTTGTTTCAGGCGTTGCTGGGGGGCGTGAGTC TTTATGTCCTGTCGGCCGTTCGCGGTTATGTGGCGGGCGAGAGCCTGTGGTCCAAGGGCCAGAAAGACGCCATCTATTACCTCAATCTGTACGCCGACAG CCGCGACGAGGCGATCTACCTCAAGTACCAGAACGCGATTGCCGTGCCTCAGGGCGGTCATCAGTTGCGCCTGGCACTGGACAAGCAACCGCCCGACCTG CAAGCGGCGCGTGAGGGCATTCTCAAGGGCGGCAACCACCCGGACGATGTCTCCAGCCTGATCTGGCTGTACCTGAATTTCCGTCACTTCAGTTATCTGG AAATTGCCATCGACCGCTGGACCCTGGGCGACGCCTATCTGGTGGAACTTGATGGCGTGGCGCAGGAGATGCATCAGCGCATCACTGCCAATGCGGCGAC CGAGGCCGATATCCGCCGCTGGAAAGACCGGATCTTCGCGATCAACGACGGCGTGACCCCGGCCGCCAAGGCGTTCAGCGATGCCCTGGGTGAAGGCTCG CGGATGATTCTGCGTCTGCTGCTGTTTACCAACCTGGCCACCGCACTGGGCCTGATCGTGCTGGCGCTGCTGCGCACCCGCAAACTGCTCAAGCAGCGTC ATGCTTTCGCCGAAGCGTTGCAACTGGAAAAAGATCGCGCGCATGTCACCCTGCATTCGATTGGCGACGGTGTGATCACCACCGACGTGAGCGGGGCGAT CGACTACATGAATCCGGCCGCCGAAGCGTTGACCCACTGGAAGGCCGAGCAGGCGTCCGGTCTGCCGCTGGCGGCGTTGTTCAATTTGCTGGATGACAAC GCCCAGACGGAAGGGCTGACCCTGATCGAGCACATTCTCAGTGGCCAGCTGACCGGCGGCAGCGAACACTCGAAGCTGATCCAGCGACTGGACGGCAGCA CGGTGTCGGTGACCCTGGTCGGCGCGCCGATCCGCAATGCCGGCAAGGTCAGTGGGGCGGTGCTGGTGCTGCATGACATGACCCAGGAGCGGCAATACAT CGCCAATCTGTCATGGCAGGCCACCCACGATGCACTGACCGGGCTGGCCAATCGTCGCGAGTTCGAATACCGGCTCGAACAGGCGCTGCACAACCTGACG CGCCAGGCCGGGCGGCATGCGCTGATGTTCCTCGATCTGGATCAATTCAAACTGGTCAATGACACCTGCGGGCATGCGGCCGGCGATGAGTTGCTGCGGC ATATCTGCGCGTTGCTGCAATCGGGTTTGCGCGAAGGCGACACTTTGGCTCGGCTGGGCGGCGACGAGTTTGGCATCCTGCTGGAGAACTGCGCACCGGA GGCGGCGGAGAAGATCGCCGAGAGCCTGCGTCAGACCGTGCAAAACCTGCATTTTGTCTGGAAGGGGCGGCCATTCCTGACCACCGTCAGTATCGGGCTG GTGCACGTCGCTCAGAACCCGACCACTCTCGAAGCCTCGTTGCGGGCCGCCGATATGGCTTGCTACATGGCCAAGGAAAAGGGTCGCAACCGGGTGCAGG TCTACCATGCCGACGACTCGGAATTGTCCCTGCGCTTTGGCGAGATGGCCTGGGTGCAACGCCTGCACATGGCCCTGGAAGAAAACCGCTTCTGCCTCTA CGCCCAGGAAATCGCCCCCTTGGGTTCGGCTGCCGGTGGCACTCGCGGACATATCGAAATTCTGCTGCGTCTGCATGACGAAGCGGGCCGGATGATTCTG CCGGACAGTTTCATACCAGCGGCGGAACGTTACGGTTTGATGACCTCGCTGGATCGATGGGTTGTGCAGAATGTATTTAAGGTTATTGCTCAATGTATTA ACGATAAGTGCGAAGGCCCTCTGGCAATGTGTGCGATTAATCTTTCAGGCATTACTATCGGAGATGACGCGTTCTTGCACTTCCTGCGAGAACAGTTTGA TAACTACGGCGTACCGCCTGAAATGATTTGTTTTGAAATTACAGAAACCAGTGCCATTGCAAATCTCGGGAGCGCAATCAGATTTATTAATGAACTCAAA GGCTTGGGCTGTTATTTCTCACTGGATGACTTTTGTGCCGGAATGTCTTCATTCGCTTATCTGAAACATTTGCCTGTAGACTTCCTGAAGATCGACGGGA GTTTCGTAAAGGATATGCTGGACGACCCGATTAACCGTGCAATGGTCGAAGTGATCAATCACATCGGGCATGTCATGGGTAAGCAGACAATTGCCGAGTT TGTCGAAACAGCGCAGATCGAGCAGGCATTGCTTGAAATCGGCGTGGATTACGCTCAGGGTTATGTAGTGGAGCGTCCGCAGTTGTTTACCTGTGACAGT TTGCAAAGTCGGCCCGCCAGACCGCAGCCGTTGTTATTCAAGGCGCCTGGCACGTTCCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGTCTCTTGCCGATCCTTACAATCACAAATCAAAAGGAGCCGAACAGTGATCGACACATTCAACCGAACCGGACCACTCATGGAAGCTGCAAGTTATCCC GCCTGGGCGCAACAGTTGATCCAGGATTGCAGCGAGAGCAAACGCCGGGTTGTCGAACATGAACTTTATCTGCGCCTGCGTGATAACAAGCTCAGCGCCA AAACCATGCGCCAGTACCTGATCGGGGGCTGGCCCGTCGTTGAGCAATTCGCGTTGTACATGGCACAGAATCTCACCAAGACCAAATTTGCCCGCCACCC GGGTGAAGACATGGCGCGGCGCTGGTTGATGCGCAATATTCGCGTCGAACTCAACCACGCCGATTATTGGCTGCATTGGAGCCGGGCCCATGGGGTGAGC CTGGAAGATCTGCAGGCGCAGCAAGTACCACCGGAGTTGCACGCCCTGAGCCACTGGTGCTGGCACACCAGTTCGGCGGATTCACTGATCGTGGCCATCG
Amino Acid Sequence
>PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
MKQKRTLGTPRLLGIVWPFIAVVLFQALLGGVSLYVLSAVRGYVAGESLWSKGQKDAIYYLNLYADSRDEAIYLKYQNAIAVPQGGHQLRLALDKQPPDL QAAREGILKGGNHPDDVSSLIWLYLNFRHFSYLEIAIDRWTLGDAYLVELDGVAQEMHQRITANAATEADIRRWKDRIFAINDGVTPAAKAFSDALGEGS RMILRLLLFTNLATALGLIVLALLRTRKLLKQRHAFAEALQLEKDRAHVTLHSIGDGVITTDVSGAIDYMNPAAEALTHWKAEQASGLPLAALFNLLDDN AQTEGLTLIEHILSGQLTGGSEHSKLIQRLDGSTVSVTLVGAPIRNAGKVSGAVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLEQALHNLT RQAGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICALLQSGLREGDTLARLGGDEFGILLENCAPEAAEKIAESLRQTVQNLHFVWKGRPFLTTVSIGL VHVAQNPTTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMAWVQRLHMALEENRFCLYAQEIAPLGSAAGGTRGHIEILLRLHDEAGRMIL PDSFIPAAERYGLMTSLDRWVVQNVFKVIAQCINDKCEGPLAMCAINLSGITIGDDAFLHFLREQFDNYGVPPEMICFEITETSAIANLGSAIRFINELK GLGCYFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKQTIAEFVETAQIEQALLEIGVDYAQGYVVERPQLFTCDS LQSRPARPQPLLFKAPGTFR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site