Pseudomonas fluorescens Pf0-1, Pfl01_3792
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCACCTTCTGGTTGTCGCTGACCAGCACTTCTTCGATGTAACCGGCGACTTTCGGCCCGATCACCGTGACGTCGCCGCCGATGTAGGCATCGTCGGTTT CCTCGAGAAATCGCCCCGTGCCCCACCAATGCACGGCATACAGGCCGGCGAGCACCAGCGCGGCCAAACCCGCAGTGGGCAACAGCAGGCGTTTGAGCAG GGGAGGTTTGGGGGCGCTGACCGGAACGGCGAGATCGGGTTCTACGGTGGGCATGCTGGTCATGGCGTAATACCTGAAGAAGCGGAATGGCTATTACGAC CGTAATATGACGTGAGTAATATTTTGTGGCAATTGATTTTTATCGCCGGTCGTCAGATGAATCTTGTTGAAAGCAAAAGCTGATCATTTGTTTAAGAAAT GTAAGCGCTGTAGGAAGCGTCTTGCATTTGTGTAGGAAGGCTCTGACTATCACCGCAATTGATGGGGTGGCATTACGCCAGTTGATTGCAAGGATGTTGA
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| DNA Sequence for Gene |
>Pfl01_3792
GTGCCGTATTCGCTTTGCGTTGTTTCTCGTTGTCGTTCCCTGCCGCGCCCGCTGTTGTCGGCCTTGTTGTTGAGTGTGTGCGCGCCCAGCGTTCTCGCCG CCGAAACTCCAGCCCCTGGCCAGGAAGTGCTGCGTCAGCAGCAACTGCAACAGCGTGACCTGCAACAACTGCAACTCGAACAGCGCAAACGCCAACTGGA GCGCGGCGCGTTTGGCCCGACGCCGGTCAATCCGGACATTCCTGAGTCGATCAAACCTGATGAGCGCTGCTGGCCCTTGAGTGGTACGCGCATCGGCGGT GTGACGCTGATCGATAAAGACAAACTCAACGCCCGGATCAAACCGCTGTTGGCGCCGTGCATGGGCGTCGGCCAGATCAACCATTTGCTGGCGACCATCA CCGCGCTGTACGTGGAGAAGGGCTATATCGCCAGCCGGCCATACCTGAGCAGCGCTCCAGCGGCGGGGCAATCGCTGGATATCCTGATCGACGAAGGCTA CATCGAGTCCATCGAGCTGGCCGACCAGAGCCTGCCAGTGTCGCTCGGCGGGGCGTTCCCCGGAATGCTCGGCAAACCGCTGAACCTGCGGGATCTGGAG CAGGGGCTGGATCAGTTGAACCGTCTGCGTTCGCTCGATCTGACCGCCGACATCGCCCCCGGCGGCCAGCCCGGTGCGTCAAAAATCATCTTGCGTTCAC GTACTTCCGGGCAGTCACGCTGGGCCCTCGGTGCCGGTTTCGACAACCTAGGCAGTGCCAGCACCGGTCGCGATCGCGACACGCTGAGCCTGACGCTCGA CAGTCCGCTCGAACTCAACGATCTGCTGAGCCTCAGCGCCAGCGACACCCTCAATCAGGGCGACCGCTACAGCCGCAACGCCAGCCTCTATTACGCGATT CCCTACGGTTACTGGACGTTCAGCGCTTTCGCCAGCCACGCCGAATACCGCGCGCCGTTCAAGCTCAGCACGGCGACCCTGTACAGCACCGGCATCACCG ATCAGCTCAGCCTGCGCGCCGACCGGGTGTTGTGGCGCGACCAGAGCCATCAGCTCAGCGCCAACTTGCAACTGGCGCACAAGGACGTTGACAGTTATCT GGAAAACGTCCGCCTCGGCATTCAGAGCCCGACCCTGACCGTGGCCGAAGCCGGGCTCAATCTGTTCTGGCTCGACCGCGCGGTGTGGAACCTCGACGTC AATTACGCCCAGGGTTTAAGCGGGTTCGGTGCCGACGACGATGCCGATCGCCAGGTCAAAAACCTGCCCAAGGCACAGTTTCGCAAGTACCGCGCCGGCC TCAGCCAGTGGCGCAACGGCCAGCTCGGCGCGCAAGCCTGGCAATGGCAGAGCCAACTCAATTTGCAGTACAGCCCGGATCCGTTGCCGGCCATCGAACA ACTGCTCGGCACCGACGATTCCGCCGTGCGCGGTTACCGGGTCAGCAGCGCGTCCGGCGCCAGCGGCGCGATCTGGCGCAACACCTTGCGCCTGCCGCTG CGCAGCGATTTGCCGGTGCAGCTCACCCCGCGCGTCGGCCTCGACCACGGCTGGATCAAGGCCGATCACGGCGCTCCGGTTCAACGCCTGAGCGGCGCCA GCATCGGCCTCAACCTGGGCTGGAAAAACCTGCAGGTGGACGTCGATTACCAACGCAGCCTGAACACCCCGACCGGCCTGCACCGCGAACCTGAAACCTG GTTGATGCGGGTCGGATTACAGATATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGTCAGTGAACAACAGCCATCGGACCTGAGCGCGACAGCCGTGGCCTTCAACTTAACGCGCAACGTGATGCCGCACTACATGGAGAGTTTTTTATGCCA ATGAATACCTTTGCGTTTCATTTTTCCCCACGGGGCAAACTGCGCTGGGCGATTGCCAGCCTGTTTCTGGTCGCTCACCTGCCGGGCGCCATGGCCGGCG GTGTGGTGGTGGCGCCCGGCCCCGGCGGCACCGCGCAATTGCAAACCCAGGGCGGCGTCCCGATCGTCAACATCGTTGCGCCCAACGGCTCGGGCCTGTC GCACAACCAGTTCCTCGACTACAACGTCGACCGACAGGGCCTGGTGTTGAACAACGCCTTGCAGGCCGGGCAATCGCAGCTCGCCGGGCAACTGGCGGCC AACCCGCAATTGCAGGGCCAGGCCGCGAGCGTGATCCTCAACGAAGTGATCAGCCGCAACCCGTCGGCCATCAACGGCGCCCAGGAAATCTTCGGTCGCG
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| Amino Acid Sequence |
>hemolysin activator HlyB
MPYSLCVVSRCRSLPRPLLSALLLSVCAPSVLAAETPAPGQEVLRQQQLQQRDLQQLQLEQRKRQLERGAFGPTPVNPDIPESIKPDERCWPLSGTRIGG VTLIDKDKLNARIKPLLAPCMGVGQINHLLATITALYVEKGYIASRPYLSSAPAAGQSLDILIDEGYIESIELADQSLPVSLGGAFPGMLGKPLNLRDLE QGLDQLNRLRSLDLTADIAPGGQPGASKIILRSRTSGQSRWALGAGFDNLGSASTGRDRDTLSLTLDSPLELNDLLSLSASDTLNQGDRYSRNASLYYAI PYGYWTFSAFASHAEYRAPFKLSTATLYSTGITDQLSLRADRVLWRDQSHQLSANLQLAHKDVDSYLENVRLGIQSPTLTVAEAGLNLFWLDRAVWNLDV NYAQGLSGFGADDDADRQVKNLPKAQFRKYRAGLSQWRNGQLGAQAWQWQSQLNLQYSPDPLPAIEQLLGTDDSAVRGYRVSSASGASGAIWRNTLRLPL RSDLPVQLTPRVGLDHGWIKADHGAPVQRLSGASIGLNLGWKNLQVDVDYQRSLNTPTGLHREPETWLMRVGLQI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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