Pseudomonas fluorescens Pf0-1, Pfl01_3533
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGCACATTGCCTACTTCAATTCCTCGAAATTCATCAGCGATCTGTCCAACGGCAACATTTGCGTGGCGGTCGGCTGGTCCGGCGCGATGCTCGAAGC CAAGTCCACCGCCGAGCAGGCCGGCAACGGCGTGAAGATCCGGTACAGCCTGCCCAAGGAAGGCGCGCCAGTGTGGTTCGACACGCTGGTCTTGCTCAAG GACGCACCGCATCCGGCCCAAGGCCTGGCGTTCATCGACTACCTGCTGCGGCCCGATGTGATTGCGCCGGTCAGCGATCACTTGTCCTACCCCAACGGCA ATCGAGCCGCGACGGCGCTGGTCGCCCAGACCACCCGCGACAACCCGGCGGTGTACCCGTCAGCCACGGCGATGGCCACGTTGTACACCCTCGAGCCCTT GCCCAAAGCCACCGAACGGGTGCGCACGCGGGTGTGGAGCAAGGTCAAGAACGGCCAGTAACACCCCTTCAAATCACTGCCTTCAACAGAGAGAACATCA
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| DNA Sequence for Gene |
>Pfl01_3533
ATGAAACCACGTGCCCGCGATCTCCACATCCGCATCGGTCAATTGCAGCCTGGCCCGCTCAACGCCATCACCGACGTACCCGGCGTAAGGGTCGGCCACA GCAACGTGCGCGGCCGCAGCGCCAGCGGTCGTGACATCTGCAGCGGCGTCACCCTGATCGAACCACGCGCCGGTTCGACCAACGCACAACCGTGTTTCGC CGGCGTCCACGTCCTCAACGGCAACGGTGACGCCACAGGGCTGGAGTGGATTCGCGAAGCCGGCCTGCTGACCAGCCCGATCGCCTTCACCAACACTCAC AGCCTCGGCGTGGTGCGTGATGCCTTGATCGAGCTGGATCGCGCGCAGCAACCGGATGACGGCCGTCTCTACTGGAACATGCCGGTGGTGCTGGAAACCT TCGATGGGTTGCTCAACGACATCAACGGCTTTCATGTGAAGCCCAAACATGTGGCCGAAGCGATGAGCAATGCCGTTGACGGCCCGGTGCAGGAAGGCGC GGTGGGTGGTGGCAGCGGCATGATCTGCCATGAATTCAAAGGTGGGATCGGCACCGCATCACGCCGCTTGAGCAAGGCTCAGGGTGGCTGGACAGTGGGC GCCATCGTCCAGGCCAACCACGGGATTCGCAGCGAACTGCGGGTCGACGGCTACCCGGTCGGGCGATATATGGAACAGGTGGATTCGCCGTTCCTTCGCG CTTCGTTGCCGCATCCGGGCATGGGCTCGATCGTCGTGGCCCTCGCCACCGATGCACCGCTGTTGCCGCATCAATGCACGCGACTGGCGCAACGGGCGAG CCTCGGTCTGGCGCGCACCGGTGGCGGCAATGAGGATCACAGCGGCGACATCTTCATCGCCTTCGCCACCGGTAACGGCCATATCCCCCCCGCCGCCTAT GAAGGCAAAGGCGCGTCGACCTGCGACGGTTTGCGGATGGTCAACAACGATCACATCAGCGAGTTGTTCCTGGCGGCGACCGAGGCGGTGGAAGAAGCGA TCATCAACGCCTTGCTGACCAGCGAGAGCACCGAAGGCAACGGGCATTCGGTGCCGGGGCTGGATGCCGCCACCCTGCTCGCGGCCCTGGATAAAGCCGG GTGGCCGGGTGCTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACTCAGCGGAACAACCCAAGTCCGAGTTCGCGGGCCGCCTGCAACTGCATTGCCGGATCGCTCGACTCGGACTCCAGCAACAACGCCGAGCTCGTCACC GTCGCCCCGCAGTAATCGAAAATGCCGTGATCGATCTGTGCCTTCATCGCTGCGCCGTAGCCGTGGCGTTCGTAAGTGCGCGCATCCGCTCCGCCGAGTG CAACCAGGTGCACGCGAAGTCGTCCGAGCTTCTTCAGGGTCTTATCGCCGTCGAAATCGTACGCCCAGCCATTGCTGAACACCCGGTCGATCCAGCCTTT GAGCAGCGCCGGCATCGACCACCAGAACACCGGATAGACCAGCACCAGCGCATCGGCGCGGTCGATGCGTGCCTGCTCGGCCAGCACGTCCGCCGGTGGC GCGGATTCGCGGTGATGCACCGCCCAGTCGGCCACACCAAAGCGTGGGTCGAATTCTTCGGCGTGCAGGTCGGCGATTTCGAAGGTGTTGGAGGGATCGC
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| Amino Acid Sequence |
>peptidase S58, DmpA
MKPRARDLHIRIGQLQPGPLNAITDVPGVRVGHSNVRGRSASGRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDATGLEWIREAGLLTSPIAFTNTH SLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDGLLNDINGFHVKPKHVAEAMSNAVDGPVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQGGWTVG AIVQANHGIRSELRVDGYPVGRYMEQVDSPFLRASLPHPGMGSIVVALATDAPLLPHQCTRLAQRASLGLARTGGGNEDHSGDIFIAFATGNGHIPPAAY EGKGASTCDGLRMVNNDHISELFLAATEAVEEAIINALLTSESTEGNGHSVPGLDAATLLAALDKAGWPGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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