Pseudomonas fluorescens Pf0-1, Pfl01_3410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGGACATGGCCGCCAACAAGCTCGTCAGCTAACCCGGCGGCGCGGCCATGGCAGGCACCGGCTTACTTCCACCGCTGTTCGAACGCCTCGCCTCGAGC GAGGGCGACGGCGCGCGGGAGTTCGATCGGCAGGATTTGCTCGACTCGGTGCACACCGAGCTCGGGCGCCTGTTCAACACCCGCCGTGGCCCGCGCACCC TGACCTCCCCGCCCAGTGTCATCGACTACGGCATCGCCGACTGGAGCGCCCTGCAACAGCAGCGCAGCGATGACCGTCGTCGGCTGGCGCGGGACATTCG CGAAGCCATCACCCATTTCGAACCGCGCCTGCTGCTCGGCGAAGTTCAAGTCAATCCCCTGCCCGAGCACCCGCAGCGCCTGAGCATTCGCCTGCTCGGC GAGTTGCGCAGCGGCTCGCAGCACTGGCCGGTGGCATTTGTCATCGAGCCCGGCAACGAAGGGCTGGAGGTGCGCCATGAGCGACTCGATTGACCCGCAA
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| DNA Sequence for Gene |
>Pfl01_3410
TTGCTCGACTACTACCAGCGCGAACTGACCTGGCTGCGACATGCCGGCGGACAGTTTGCCGAACGCTATCCGAAAGTCGCGCGACGTCTGGAGTTGTCTC CCGGCGAATGCCCGGACCCACACGTCGAACGATTGCTGGAAGGTTTTGCCCTGCTCGCCGCACGTCTGCAACGGCGGCTGGATGACGACTACGCCGAGTT CAGCGACGCATTGCTCGAACAGCTTTATCCCCTGGCCATGCGCCCGCTGCCGTCCTGCGCGATCGTCCAGTTCGAACCGGACCCGAGCAAAGGCAACCTC GACGGCGGCTATCCCCTGCCCCGGGACACGCCGTTGTTCGTCACCACCAGCAAGGGCGAAAGCATTCACTTTCGCACCAGCGCCGCCGTGCGTTTGTGGC CGGTTGAAGTCAGCGAAGCGTTGTTGCTGGGCAGCGATGAAGCCCAGGCGCTGACCGGTGTGGCGCAGTCCCGCTCGGCGTTGCGCCTGAGTCTGCGTTG CCTCGGCGACAGTCAGTGGTCGGAGCTTGGCATCGAACAACTGCGCATTCACCTGGCCGCGTCACCGGTGGTCAACGCCAACCTCTATGACCTGCTCGGC GCCCACGCGGTGCAGGTGTTGGCCGGCTCACCGGGGAGCATTCCCGCCCGCGTGAAAGGCCTGCCGAAGATCGTCGGTTTCGCCGACGACGAAGTGCTGC TGCCGGACGAAGACGGCGTGCATCCGGGCATGCGTCTGCTGGCCGAATACTTCGCGTTCCCGGACAAATTCCACTTCTTTGATCTGCCCCTGTCCGGTGT TTCGAGTGACAGCCAGACGCTGTATCTGTACATCGTTTTTGACCGGGCGCCGGCCGGCCGATTGCACTTGCAGGCCACTGAAATCGCCCTCGGCTGTGCG CCGGTGATCAACCTGTTCCCGCGTACCTCGGAGCCGCTGCGTCCGGACGGCACCCGCAGCGAATATCGCCTGATCGCCGACAGCCACCGTGAAAACAGCG TCGAAATCCACAGCATTCGCAGCATGCGCGCCAGCTCCGCCAGCGGGGTGCAACGGCTGCCGGCGTATTTCGGCAGCCAGCACAGCAGCGGTGACCGGCA ACGTTACTGGCATGCGCGGCGAGTCAACGGACAGACGCCGAACCGGCTCGGCAGCGATCTGCTGGTCAGCGTCGTCGACACCCGTTTCGAACCGCAGACC GACCTGCCCGATTACAGCCTGACCGCCGAACTGCTGTGCACCAATCGGCATCTGGCCCAGAGCCTGCCCGCCGGTACGCCGCTGGGTTTCGAACGGCCGG GTCCGGTGGCGTGGGCACGCTTGCGCAATCCGCCGAGCCCGCAAAGCCTGCCGCGACTGGACGGTGATTCGCGCTGGCGGCTAGTGTCGCAACTGACCCT CAATCACCTGTCGCTGGTCGAAGGGCCGCAGGCGCTGGATGCGCTGAAGGAAATCCTGACCCTGCACAACCTGCGCGACGAGGCCAGCGCCCTGCGCCAG ATCGAAGGATTGCTGAACCTTGGTTGCGAGCGGGTGATCGGCCATGTCGGCGCCGACGCCTGGCGCGGCTGGCGCAACGGGCTTGAAGTGCAATTGCAGC TTGATCCACAGCATTTCGTCGGCAGCAGCGCGGTGTTGTTTTCAGCGGTGCTCGCGCAGTTCTTTTCGGTGTACGCCACGGCCAATCGCTTTGTGCGCAC GGTGCTCATGCAGGCAGACAAGGAGGTCAAGGCATGGCAACCCCAAGCCGGCATGCCCCTGTCGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGAGCCAGCGCCTGCGCCGTGATCCGCAGGCGTTCGAATGGTTGCAGGCGCTGCTGTTGCTGGAGCGTGAACAGCCGCAGGCCGACGCCCTCGGCTC GGGGACATCGCCACAGGCCGAAGCGCTGAAATTGCGCGGGCCGCTGACGCCATTATTCGCCGCCAGTCAGATCGAAAGCCTGGAGGAAAACCCCGGTGAA CCGCTGACCCTGAACTCGCCGATGTTCGGCCTCGGCGGCCCCGACGGCCCGCTGCCTTACGCTTATCAGGAATGGCTGCAACAACGGGCGCGGGCCAAGG ATCATGCGCCCGCCGAGTTCCTCGACCTGTTCCAGCATCGGCTGCTGAGCCTGCTGTACAAGGTGATGCGCAAACACCGGATCGCCCTCGGTTTCACCAC GCCCGGCGCCTCGCCAGTGCAGGCGCAACTGCGGGCGCTGACCGGGTTGTTGCCCAAATCCCTGCAAGAACGCCAGGCGGTTCCCGACTGCGCCGTTCTG
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| Amino Acid Sequence |
>hypothetical protein
MLDYYQRELTWLRHAGGQFAERYPKVARRLELSPGECPDPHVERLLEGFALLAARLQRRLDDDYAEFSDALLEQLYPLAMRPLPSCAIVQFEPDPSKGNL DGGYPLPRDTPLFVTTSKGESIHFRTSAAVRLWPVEVSEALLLGSDEAQALTGVAQSRSALRLSLRCLGDSQWSELGIEQLRIHLAASPVVNANLYDLLG AHAVQVLAGSPGSIPARVKGLPKIVGFADDEVLLPDEDGVHPGMRLLAEYFAFPDKFHFFDLPLSGVSSDSQTLYLYIVFDRAPAGRLHLQATEIALGCA PVINLFPRTSEPLRPDGTRSEYRLIADSHRENSVEIHSIRSMRASSASGVQRLPAYFGSQHSSGDRQRYWHARRVNGQTPNRLGSDLLVSVVDTRFEPQT DLPDYSLTAELLCTNRHLAQSLPAGTPLGFERPGPVAWARLRNPPSPQSLPRLDGDSRWRLVSQLTLNHLSLVEGPQALDALKEILTLHNLRDEASALRQ IEGLLNLGCERVIGHVGADAWRGWRNGLEVQLQLDPQHFVGSSAVLFSAVLAQFFSVYATANRFVRTVLMQADKEVKAWQPQAGMPLSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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