Pseudomonas fluorescens Pf0-1, Pfl01_1854
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACAGTTCCGGCCAGCCGAAAATCGTCAGTGCTGCACCGGACAGTTGCCCGCGATTGGCTTTTATCAGGTCGAACTGACCGGGGCCGTCCTTGTCGGCTTC ATTGCCGTGGGTGCCGAAGTCCTGAAGGACGGTGATGTGGCTGTCGAAGGACAGCAGGTGCTGGTGCATCTCGCGGGCCTGGTCCATCACCTTGACCGGA TAGCCGGGATTGTCGTTGAGCCAGTAATCCCAGGCTGCGAAGCCTGCTGCGGCACTGATCGCCAGGGCCAGTGGCAGGCCAATGAAAAGAGCCTTTTTCG AACGTGGTTTTGTCATTGCCATCTCAGTCAGGTTCGCCGTCAAGGTGCTGGCGCAGGGGCCATTGCTATCTGGAAAGAACGAGTGATTGGCAACGAAATT TAGTCGCATCGCCCTGTGGCGCGGGCGCCCTTAAATTTGTCGGGGCAGCGTACGTTCTAGCTTGGATAAAGCCTGCTTCATGGCTGACACAGGTAGGGCA
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| DNA Sequence for Gene |
>Pfl01_1854
ATGAAGATTTCTCGACGATGGTTCATGGCAGGCCTGGCGCTGACCGGCGCTGCGGTGCCTGCGGCTTATTTTGGTCATCGTGAATGGACCAGACCGGACC CCACGATCACCCCCGGCGAGGCGTCGTTCGACGTGGCCGACACGGCCGGTCAACGCCTGGCGAACAAGTTGCGCGGGGTTTGGGATATCCGTTTCGAGGG CCGCGACGCGGGTGTCGAAGGGCTGCCGGCAAGCGGTCTGCAAGTGTTTCTCGACATCGGCCAGAAGGGGCGCGGTGTCTGCGGCTTTCTGGATACGCCC GAGCGTCTGCGCTCTGGCGAAACACCGCGTTACCGAATAATCGGTGATCTGGCCGAGGGCGACGCGGCGAAGTTGAGCTGGCGGCTGATCAGTGCCAACG GCCATATCGACTACGAACTGCAAATGATCCTCGACGAAGTCTGGGCCGACTTCGGCAACGCCGGCAGCGGCAGCCTCAGCGGTCGGGTGTCACGTCTGGA TCGGCCGCTGGCTTTGCCGATGCAGGACAACCGCTTCATTGCCGTGAAACAGTTATTCCCCGAAGCGCGGCAGCGTACGCCGCTGAACCCGACGCTGCTG GCGTGGCTGATCTCCCCCGAACACCGGTTGTTTCACCAGGTCTGGCACGCCACGCGGGACAAGTGGCACACCCTGGCCGAAGACAAACGCAATGCGTTGC GCGGTCTCGGCTGGCAACCCGGCCCGCGCGGCAAGGAGCGCGATGCCCGTGGCGATCGCAAGGATCGCAACGGCTCGGGCGTCGACTTTTTCTTCATGCA CCGGCACATGCTGGGCACGGCGCGTTCGATGCAGGATCTGCCGTCGTGGGAATACTTCCCGCTGCCGCAGCCCGAGCTGATCCGCGACCGGGTCGGTTTC GCCCGTTACTTCGACAACCACGACGGCACGGCACTGCCGCCGACGTGGCTGGCCGATGGCGACAACGAATACAGCCAGTGGGTCAGCGACCTGAAAACCG CCGAGACCTACGAAAGCAACTTTCAGGTATGGGAATCGCAATACCGCGATCCGGCTTATCTGGCCAAACTCACGCTGGGTCAGTTCGGTTCTGAAGTGGA GTTGGGGCTGCATGACTGGCTGCATATGCGCTGGGCCTCGGTGCCGCGTGATCCGTCCAACGGCCAGCCGGTGCCGTTTGCCCGTGATCCGGCGGATTTC GCCGCGCGCTGGTTTGCGGCGGAAAACGACTTCCTCGGCGATCCGTTTTCATCCCACGTCAACCCGGTGTTCTGGCATTTCCACGGCTGGATCGATGACC GCATCGAGGACTGGTTCCGCGCTCACGAGCGTTTTCACCCGGGCGAAGTCACCCGGCAAGTGGTCAACGGTGTGCAGTGGTTTGCGCCGGGGCGCTGGAA TGAGGTCGCGGATCCGTGGCTGGGGCCGACCACCCACGGTTGCAGCACCACGCCGGGGTTGCAGGTGGGCAAGTCAGTGGAGATGGATCCCGAGACCATG AAGCTGGCGCTGCGCATCACCTTCATCGGCGACGAGAAGAAACTTGCCGCGCTGTTCCGCCGCGTGCCGCAACGGCCGTGGTATGCGCGTCATTTGAAAG CCAAGGTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACAAAAGATCGCAGCGTGCGATCTTTTGTTCTTCAGCGCGTCTCCCAACCCCCACCCAACGCTTTGTACAGCGCAATGCTCGCCTGCATCCGCGCCAGC CGCAGTTGCACGTTGAGATCCTGCGCGGCGTACAGCGTGCGCTGGGTTTCCAGTACGGTCAGCAAGTCTTCGGCGCCGGCCTGATAGCGGCTCTGGGAGA GGTTGAACGCGGTCTGTGCCTGATTCAGCTCTTCGGTCTGCCATTGCCGTTGTTGATCCAGGCCCTGAATGCTGTTCAGGGCTTTTTCCACGTCGGCGAA GCCGTTGATGATCGCGCCGCGATAGGTTTCCAGCAGTTCTTCCTGGCGGGCGGTCGCCTTGTCGCGTTCTGCGGACAGGCGACCGTTATTGAAGATCGGT GCGATCAGCCCGGCGGTGAGGTTGTAGAACGGGCTACGCATCACATCGTCGAAGCGGTTGGCGCCGGAGCCCAGCTGCGCGCTCAGGGTGACCTTGGGCA
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| Amino Acid Sequence |
>twin-arginine translocation pathway signal protein
MKISRRWFMAGLALTGAAVPAAYFGHREWTRPDPTITPGEASFDVADTAGQRLANKLRGVWDIRFEGRDAGVEGLPASGLQVFLDIGQKGRGVCGFLDTP ERLRSGETPRYRIIGDLAEGDAAKLSWRLISANGHIDYELQMILDEVWADFGNAGSGSLSGRVSRLDRPLALPMQDNRFIAVKQLFPEARQRTPLNPTLL AWLISPEHRLFHQVWHATRDKWHTLAEDKRNALRGLGWQPGPRGKERDARGDRKDRNGSGVDFFFMHRHMLGTARSMQDLPSWEYFPLPQPELIRDRVGF ARYFDNHDGTALPPTWLADGDNEYSQWVSDLKTAETYESNFQVWESQYRDPAYLAKLTLGQFGSEVELGLHDWLHMRWASVPRDPSNGQPVPFARDPADF AARWFAAENDFLGDPFSSHVNPVFWHFHGWIDDRIEDWFRAHERFHPGEVTRQVVNGVQWFAPGRWNEVADPWLGPTTHGCSTTPGLQVGKSVEMDPETM KLALRITFIGDEKKLAALFRRVPQRPWYARHLKAKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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