Pseudomonas fluorescens Pf0-1, Pfl01_1213
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCTGCAATGGTTGTTCTGGCAAATGGGCGGGCTGGGGCCGATGGCCGGGCAGAACCATCATTTCAGCCAGTTCGCGCCGGAAAAAATCCCCTACGCGA TCAAGCGCTACGTCGATGAAACCGCCCGCCTGTACGGGGTGCTGGACAAGCAACTGGCCAACAATGAGTTCGTCGCCGGCGGCGAATACAGCATCGCCGA CATGGCGATCTACCCGTGGATCGTCTCGCACAAATGGCAAAGCCAGAACCTTGAAGACTTCCCGAACGTGCAGCGCTGGTTCAACCACATCAAGGATCGC CCGGCGACCGTGAAGGCCTACGCGCTGGTGCAGAAGATCAATCCACCGAAGGCTTGAGTCACCCGGCCTGATCGTTCCCGTGCGCGGGAACGATCAACGG GAAGAAATAACCGCTCGCCCCGCTTGCGCGGCCCCCTCCTGCTCACTAACGTAGCGGCTTTATTGCGCCCCCAGCCTCTACACCCCGCAGGAGCTTTGCC
|
|
| DNA Sequence for Gene |
>Pfl01_1213
ATGGCCTCGCCAGCCCTTTCACATTTTCTTCCCCGGTTCGGCGTTGCCGCAGCAGTGGCCGGTGTTCTGAGCCTGACCGGTTGTCAGACCTGGAACGCCC AGGACACCCTCCCGCCGACCTCCGGTGTGCAGCCGCTCAAGGGCCTGGCGCAGAACGTTTCGGTACGCCGCAATGCCATGGGCATGCCGCTGATCGAAAG CAACAGTTTCCACGACGCGTTGTTCGCCCTCGGCTATGTGCACGCCAGCGACCGGATCAATCAGATGGTCACCCTGCGCCTGCTGGCCCAGGGTCGTCTC GCGGAAATGTCCGGTTCGTCGATGCTCGACGCCGACCGCTACATGCGCGCCGTCAACCTGAAGAAAAGCGCCGGCGAGCTGTACAAGGCTTCGTCGCCAC GGCTCAAGCGTTTCTTCGAAGTCTATGCCCGGGGCGTCAACGCCTACCTGTTCCGCTACGCCGACAAGTTGCCGGGGGATCTGGCTTCCAGCGGCTACAA GCCTGAGTACTGGAAACCGGAAGATTCGGCGCTGATCTTCTGCCTGCTGAACTTCAGCCAGTCGGCCAACCTGCCGGAAGAAATCGCTTCGCTGGTGCTG GCACAGACCGTGACCAACGACAAACTGGCGTGGCTGACCCCGTCCGCTCCCGACGAAAACCTGCCGCTGGCCGAAGCCGACAAGCTGCAAGGCATCAAGC TCAACGGGCAGATTCCGGGGCTGACGGAACTGAGCAACGCCAGCGAACAACTGGCCGCCCTCAACCTGCTGGGCACTCAGTCATCGAACAACTGGGCCAT CGCCCCGCAACGCAGCCGCAGCGGCAAGAGCCTGCTGGCCAGCGACAGCCATGGCCCGCTGGCCGCGCCGTCGCTGTGGAGTTTCGTGCAGATCCGCGCT CCGAAATACCAGGCCGCCGGCGTGACCGTGGCCGGTCTGCCGATGGTGCTCGGCGGTTTCAACGGCAAAGTGGCGTGGAGCCTGACCAGCGTGCTCGGCG ATAACCAGGATCTGTTCCTGGAAAAAATCCGTCGTCAGGGCAGCAGCCTGACCTACGAGGTCAACGGCAAATGGCAACCGGTCGCCGTGCGCAACGAAAC CTACTTCGTCAAAGGCCAGCGGCCGATTCGCGAAGCGGTGTACGAAACCCGCCATGGCGCGCTGCTCAACAGCACCCAGGCTGCCGCTCAGGGCACAGGT TTTGGCCTGGCCTTGCAGACGCCGAGCTTCACCGACGACAAATCACTCGATGCGTTTTTCGATCTGAGCCGCGCGCAGAACGTGGAACGCGCCTCGGACG CCACCCGGGAAATCCGCGCCATCGCGCTGAATCTGGTGTTTGCCGACGCCAGCAACATTGGCTGGCAAGTCACCGGGCGCTTCCCGAACCGCCGTGAAGG TGAAGGTTTGCTGCCGTCGCCGGGCTGGGAAGGTCGCTACGACTGGGACGGTTACGCCGACCCGATGCTCCACCCCTACGATCAGGACCCGGCCCAGGGC TGGCTCGGCACCGCCAACCAGCGGGTCATTCCCCACGGCTACGGCATGCAACTGTCCAATTCCTGGGCAGCGCCGGAGCGTGGCGAGCGCCTGGCCGAAC TGGCCGGCAGCGGCAAGCATGACAGTCGCAGCGTGATTGCCATGCAGTACGACCAGACCACCACCTTCGCCGCCAAACTGAAGAAAATGTTTGAAGCACC GGGCATGGCGCAGCCGCTGAAACAGGCGATCGACGCACTGCCGGAAGCCGAGCGCAGCAAGGCCCGCGAGGCCTACACCCGTCTGATGGCGTTCGACGGC AAGCTCAGCCCGACCTCCGCCGACGCGGCGATCTACGAGCTGTTCCTGCAGGAAAGCATGAAGCAGATCTTCCTCGACGAACTCGGCCCGCAAAACAGTC CGGCGTGGAAAGCGTTCATCGCCAATGGCGACTTGTCCTACGCCGCCCAGGCCGATCACTTGCTCGGCCGCGAAGACAGTCCGTTCTGGGACGACGCCCG CACCCCGCAAAAAGAAGACAAACCGGCGATCCTCGCTCGCAGTCTGGCAGCAGCGATCAGCGCTGGCGACAGTCAGTTGGGCGGTGATCGCAGAGCCTGG CAGTGGGGCAAACTGCACCGCTACGAGTGGAAGAATGCCAACGGCCAGAGCGTTCGCGGTCCGATCGCGGCGGGCGGTGACCATACCACCCTGAACACGG CGGCATTTGCCTGGGGCCAGGACTTCAACACCACGCGTGCGCCGTCGATGCGCTTTATCGTCGACTTCGGTCAGAGCGAACCGCTGATGGGGCAGAACGG GACGGGGCAATCGGGGAATCCGGTGAGCCCGAACTACCTGAACGGCATCGACCCGTGGCTCAAGGGCCAGTACATCGGCTTGCCGATGCAGCCGCAGAAC TTTGACCGGGTGTATGGCAAGACGCGGTTGACGCTTACCCCCGGCAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATCCCCATCTGATCGTTCCCACGTCGAGGCGTCGAACCGTCCGCGTGGGAATGCAGCCCGTGACGCTCCGCGTCACTGGACGCAGAGCGTCCCTTGAGGC ATTCCCACGCAGAGCGTGGGAACGATCATGCGACAGTTCAGAAAATCAATAGAACTTCTGACTTCGCGCCAACCTCATAGCTAACAAGTCTTCCATTCCG GTAACGCCATGGACCTTGTTATCGCCCGCCCCGAAGGTTTGTACTGCCCCGCCGGGGATTTCTATATTGACCCGTGGAGACCCGTCGAGCGCTCGGTCAT CACTCATGCCCACGGCGACCATGCCCGTGGCGGCAACCAGCATTATCTGGCTGCCAGCGCCGGTGAAGGGATTCTGCGCGCGCGTCTGGGCCAGGACATC AACCTGCAAACCCTCGACTACGGCCAGCGCCTGACCCACCACGGCGTCACCTTGAGTTTTCATCCCGCCGGTCATGTACTCGGCTCGGCCCAGGTGCGGC
|
|
| Amino Acid Sequence |
>peptidase S45, penicillin amidase
MASPALSHFLPRFGVAAAVAGVLSLTGCQTWNAQDTLPPTSGVQPLKGLAQNVSVRRNAMGMPLIESNSFHDALFALGYVHASDRINQMVTLRLLAQGRL AEMSGSSMLDADRYMRAVNLKKSAGELYKASSPRLKRFFEVYARGVNAYLFRYADKLPGDLASSGYKPEYWKPEDSALIFCLLNFSQSANLPEEIASLVL AQTVTNDKLAWLTPSAPDENLPLAEADKLQGIKLNGQIPGLTELSNASEQLAALNLLGTQSSNNWAIAPQRSRSGKSLLASDSHGPLAAPSLWSFVQIRA PKYQAAGVTVAGLPMVLGGFNGKVAWSLTSVLGDNQDLFLEKIRRQGSSLTYEVNGKWQPVAVRNETYFVKGQRPIREAVYETRHGALLNSTQAAAQGTG FGLALQTPSFTDDKSLDAFFDLSRAQNVERASDATREIRAIALNLVFADASNIGWQVTGRFPNRREGEGLLPSPGWEGRYDWDGYADPMLHPYDQDPAQG WLGTANQRVIPHGYGMQLSNSWAAPERGERLAELAGSGKHDSRSVIAMQYDQTTTFAAKLKKMFEAPGMAQPLKQAIDALPEAERSKAREAYTRLMAFDG KLSPTSADAAIYELFLQESMKQIFLDELGPQNSPAWKAFIANGDLSYAAQADHLLGREDSPFWDDARTPQKEDKPAILARSLAAAISAGDSQLGGDRRAW QWGKLHRYEWKNANGQSVRGPIAAGGDHTTLNTAAFAWGQDFNTTRAPSMRFIVDFGQSEPLMGQNGTGQSGNPVSPNYLNGIDPWLKGQYIGLPMQPQN FDRVYGKTRLTLTPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|