Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCCGATACCGTGATCGGCAATGGTGTGAAGCTCGACAACCAGATTCAGATCGCCCACAACGTGCAGGTCGGTGACCACACCGCCATGGCCGCGTGCGTG GGGATTTCCGGCAGCACCAAAATCGGCAAGCACTGCATGCTCGCCGGGGGTGTTGGCCTGGTAGGGCACATCGATATTTGCGACAACGTATTCCTGACCG GGATGACCATGGTGACCCACTCGATTACCGAGCCGGGTGCCTATTCTTCCGGCACAGCTATGCAACCTGCGGCCGAATGGCGCAAAAGCGCGGCCCGTAT TCGTCAGCTCGATGACATCGCGCGACGTTTGAAACAGCTGGAAAAGCGGTCCGGGGAAGTGACCCCCGACGGTAATGCTTCATCTGAAGGCTGATACCAT TTCCATATCAAGTGTGCACAGCCTCTGGACTGCCTCCTTGATTTGCTAGAGGAGTGCGCGTCAGTCGCGCTCCCAATCTTTACATAGGCTTCCCCCCGAA
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DNA Sequence for Gene |
>Pfl01_1112
|fabZ
ATGATGGACATCAACGAGATTCGCGAATACCTGCCTCACCGTTACCCGTTCCTGCTGGTGGATCGGGTAGTGGAGCTGGATACGGAAGGCAAGCGCATTC GCGCCTACAAGAATGTCAGCATCAACGAGCCGTTCTTCAACGGTCACTTCCCGGCGCACCCGATCATGCCGGGCGTGCTGATCATCGAAGCCATGGCTCA GGCTGCCGGGATCCTCGGTTTCAAGATGCTTGACGTGAAACCGGCCGACGGCACCCTTTATTACTTCGTTGGCTCCGACAAACTGCGTTTCCGCCAGCCA GTGCTGCCGGGCGATCAGTTGATCCTCGAAGCCAAGTTCATCAGTTGCAAGCGTCAGATCTGGAAGTTCGAATGCCAGGCTTCGGTCGATGGCAAACCGG TCTGCTCGGCTGAAATCATCTGTGCGGAACGCAAGCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTTGATTGACCCTCGCGCAATCATCGATCCATCGGCCGTCCTGGCCGATGGCGTCGAGGTCGGCCCGTGGTCGATCATCGGTGCAGGTGTGGAAATCGG CGAGGGAACGGTCATCGGGCCACACGTGATCCTCAAAGGTCCGACCCGTATCGGCAAGCACAACCGCATCTACCAGTTTTCCTCGGTAGGCGAAGACACG CCGGACCTGAAATACAAGGGCGAAGAAACCCGCCTGGTGATCGGTGACCACAACGTCATCCGCGAAGGCGTGACGATTCATCGTGGCACCGTTCAGGATC GTTCCGAAACGACCCTGGGTGATCACAACCTGATCATGGCCTATGCCCACATCGGACATGACAGCGTCATCGGCAACCACTGCATCCTGGTCAACAACAC CGCGCTGGCCGGCCATGTGCACGTTGATGACTGGGCAATCCTGTCCGGTTTCACCCTGGTGCATCAGTATTGCCACATCGGCGCCCACAGCTTTTCCGGC
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Amino Acid Sequence |
>(3R)-hydroxymyristoyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVELDTEGKRIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQP VLPGDQLILEAKFISCKRQIWKFECQASVDGKPVCSAEIICAERKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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