Pseudomonas fluorescens Pf0-1, Pfl01_0202
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACAAAGGGATGCCACCGCCGAGCAACAGCAACTCGTCCAGCGTGTTGAGGTTGGCGGTTTCCGGGTTGTTGCGGGCGCGCTCGGCGAACAATCGAGTCGG GGTTTTCGTCGACAGCGCGGTGTAGGCCTTGCGTTGGCTGGCGGCGGTGTTGTGCGGGCCGATACCGTCGCCACGCAAGGTCACCAGCAGATTGCCGCCA CGGTCGAGCACCGACACCGTGGCGGTGCAGTTTTCCAGCGCCGCGTCGGCCAGCAGCCGCGCGGTTTTCAGATCGAGATCGGCGTGACGGGGCAGCTCAG GCGTGGCGTGCGCCGCGCCGCTGAGGCCGATCGCGAGGCTGGCAAGCAGGTATTTGACGGACATGGGCAGGCTCCAAAAGCGAAGGCCATCACCTTATCC GCCGGTCCCCGTCGAAACCTCGTCAGTCGGATTACAAGTTTGTAATGGGCAACGTCGCCGAAGGGGCCTAGCCTGTGTCTCTGATCAATCGAGGTGTGCC
|
|
| DNA Sequence for Gene |
>Pfl01_0202
ATGCGTTTGCTGGTCGTAGAAGATGAAGCCAAAACCGCGAACTTCATCGCCAAAGGGCTGGGTGAGTCGGGTTTTGCCGTGGACGTGGCGCTGAATGGCC TCGACGGTCGCTACTTTATTGAGCAGCAGGAATATGACCTGATCATCCTCGACGTGATGCTGCCGGGCCTCAACGGCTGGCAATTGCTCCAGCTGATCCG CCAGCGCGGCGCCACGCCGGTGCTGTTCCTGACGGCGAAGGACGCCATCGAAGACCGCGTGCGCGGCCTCGAACTGGGGGCCGATGACTATTTGCTCAAG CCGTTCGCCTTCGCCGAATTGCTGGCGCGGGTGCGCACGTTGTTGCGGCGCGGCCCCCTGCGTGAAGCCGAGTCGTACAACATCGCCGATCTCGAAATCG ACGTACTGCGCCGCCGGGTCAGCCGGGGCGGCCAGCGCATCGCCCTGACCAACAAGGAATTCGCTCTCCTGCATCTGCTCGCCAGCCGTCAGGGTGAAGT GCTGTCGCGCACGCTGATCGCCTCGCAGGTGTGGAACCTGAATTTCGACAGCGACACCAACATGGTCGAAGTCGCGGTGCGCCGGCTGCGTTCGAAAGTC GATGATCCGTACATGCCCAAACTGATTCACACCGTGCGCGGGGTCGGCTATCAACTCGAAGCGCCCGACGATGCGCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCGATTGCCTGGCGCCTGGCCCTGGCGTTCGCTGCTGTCTGTGCGTTGGTACTCAGTGCGATTGGCGTGTTCCTGTATCGCTCGCTGGCTGCGGAAATC GCCTGGCGCGACGACATGGCGTTGCTCGGTCGCCTGGAACAGGTGCGCGCGCTGCTCGCCGACAGCGACAGCCTCGACGCCCTGCAGGCGCGGCCACGGC TGTACCAGAACATGCTCGGCAACCTCGACAGTCTGCTGCTGGTGCAACGAGCGGACGGCTCGAACGTGATCACGATCAACCCTCGCCAACGCGCACTGCC GTCCGTGCAGGCCATCCCCCGGGATCAACCGCCGCAACGCCGCGATGTGCTGACCTGGCAGGCGGCGGACGGTGTCGAGCTGGCCCTGTTGTCAGGTCAG GCCCAAGGGCCGAACGGCGAAGCACTGACCGTGATCGCCGGCAAGGTCTTGAGCGAGCGCGAGCAGATGCTCGGCAGCTATCGCCTGCGCTTGTATCTGG
|
|
| Amino Acid Sequence |
>two component heavy metal response transcriptional regulator
MRLLVVEDEAKTANFIAKGLGESGFAVDVALNGLDGRYFIEQQEYDLIILDVMLPGLNGWQLLQLIRQRGATPVLFLTAKDAIEDRVRGLELGADDYLLK PFAFAELLARVRTLLRRGPLREAESYNIADLEIDVLRRRVSRGGQRIALTNKEFALLHLLASRQGEVLSRTLIASQVWNLNFDSDTNMVEVAVRRLRSKV DDPYMPKLIHTVRGVGYQLEAPDDAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|