Pseudomonas fluorescens Pf0-1, Pfl01_0009 (glyS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAGGCGGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTACGGTCTGGAGCGTCTGGCCATGTACCTGCAGGGCGTGGACTCGGTCTACG ACCTGGTCTGGGCTGACGGTCCGTTCGGCAAAGTGACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCCACCTACAACTTCGAACACGCCAA CGTCGACAAGCTGTTCGAGCTGTTCGACTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCAAGCTACGAAATGGTC CTGAAGGCCTCGCACACCTTCAACCTGCTGGATGCGCGCCGGGCGATCTCGGTGACTGCGCGTCAGCAATACATTCTGCGCGTTCGCACCCTGGCGCGTT CCGTCGCCCAAGCCTACCTGCTGGCCCGCGCCAAGCTGGGCTTCCCGATGGCAACCCCGGACCTGCGTGACGAAGTACTGGCCAAGCTGGAGGCTGCACA
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| DNA Sequence for Gene |
>Pfl01_0009
|glyS
ATGAGTGCTCAAGATTTTCTGGTTGAACTGGGCACCGAAGAACTGCCACCCAAAGCCCTGAACACCCTGGCCGAAGCGTTCCTGGCCGGTATCGACAAGG GCCTGCAAGCTGCCGGCCTGAATTACGAGAGCAAAACCGTCTACGCCGCGCCGCGTCGTCTGGCTGTGCTGATCACCGCGCTGGCCACCCAGCAGCCGGA TCGCAGCATCAACCTCGACGGCCCGCCACGTCAGGCTGCGTTCGATGCCGACGGCAACCCGACTCAAGCGGCACTGGGCTTCGCCAAGAAGTGCGGCGTC GAGCTGAGCGAAATCGACCAGAGCGGTCCGAAACTGCGCTACAGCCAGAACATCGCCGGCAAGCCGACCGCCAGCCTGCTGCCGACCATCGTCGAAGACT CGCTGAACGACCTGCCGATCCCGAAACGCATGCGCTGGGGTGCGCGCAAGGAAGAGTTCGTACGTCCGACCCAATGGCTGGTGATGCTGCTCGGCGACCA GATCATCGACTGCACGATTCTCGCGCAGAAGGCTGGCCGTGAATCCCGTGGCCACCGCTTCCACCACCCGCAAAGCGTGCGCATCGGTTCGCCGTCGAGC TACCTGGCCGACCTGCGTGCCGCCTACGTGCTGGCCGATGCCAACGAGCGTCGCGAAATCATCAGCAAACGCACCGAAGAACTGGCGACCCGTCAGGAAG GCACTGCGATCGTGCCGCCGGCGCTGCTCGACGAAGTGACCGCGCTGGTCGAGTGGCCAGTGCCGCTGGTGTGCTCGTTCGAGGAACGTTTCCTCGACGT GCCGCAGGAAGCACTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGATGCCGACGGCAAGTTGCTGCCACGGTTCATCACCGTGGCC AACATCGAATCCAAAGACCCGCAGCAGATCATCGCCGGTAACGAGAAAGTGGTTCGCCCACGCCTCACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGA AGCAGAAGCTCGAAGCCTTCAACGATCGCCTGCAGAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAGCGGGTGTCGAAACTGGC CGCGTACATCGCCGCACGCATCGGCGGCAACGCTTCGTGGGCTGCCCGCGCAGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAAATGGTCGGCGAGTTC CCGGAGATGCAAGGTGTCGCCGGCTACTACTACGCGCTCAATGACGGCGAGCCGGAAGACGTCGCCCTGGCGCTGAACGAGCAATACATGCCACGCGGTG CCGGCGCTGAACTGCCAGCCACCCTGACCGGTGCGGCCGTGGCCATCGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCGAC CGGCAGCAAAGACCCGTATGCCCTGCGCCGTGCGGCACTGGGCGTGCTGCGGATCCTGATCGAGAAACAACTGGATCTGGACCTGAACGATGCCGTGGCG TTCGCCGTGAATGCGTTCGGTGCCAAGGTCAAGGCTGCCGGCCTGAACGACGCGGTGCTGGAGTTCATCTTCGACCGTCTGCGTGCGCGTTACGAAGACG AAGGCGTGGGTGTCGCCACCTACCTGTCGGTACGTGCCCTGAAGCCGGGTTCGGCGCTGGACTTCGACCAACGTGTGCAAGCGGTGCAGGCCTTCCGCAA ACTGCCGGAAGCGGCAGCGCTGGCGGCGGTGAACAAGCGTGTGTCGAACCTGCTGAGCAAGGTGGAAGGCTCGGTGCCGACCGAAGTCCAGGCCAAGTAC TTCGACAACGCCAACGAGTTCTCGCTGTACTCGGCGATCCAGCAAGCGGACCAGGCTGTACAGCCAATGGCCGCGGCGCGTCAGTACAACGAATCGCTGG CACGCCTGGCCGCCCTGCGCGAGCCGGTGGACGCGTTCTTCGACGCGGTGATGGTCAATGCCGAAGACGCCAACGTACGAGCCAACCGTTACGCGCTGCT GGCGCGTCTGCGTGGCCTGTTCCTGGGCGTTGCCGACATTTCGCTGCTGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGACTGCTGTTGAAACTGCTGATTCTCGATCGGGACGGAGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGGAGGAGTGGATTCCGCTGCCC GGCTCGATCGAAGCGATTGCGCAGTTGAGCAAGGCCGGCTGGACGGTGGCGGTCGCCACCAACCAGTCGGGCATTGCTCGCGGCTACTACGACCTCGCCA CCCTCGATGCCATGCACGCGCGCCTGCGCGAACTGGTGGCGGAGCAGGGCGGTGAAGTCGGGCTGATCGTGTATTGCCCGCATGGGCCGGACGAGGGTTG CGACTGCCGCAAGCCGAAACCGGGGATGTTGAGAACCATCGCGCAGCATTACGACGTCGCGCTGACGAATGTCTGGTTCGTCGGCGACAGCCTTGGTGAC CTGGAGGCCGCCAAAGCCGTCGATTCACAGCCCGTTTTGGTAAAGACCGGGAAAGGCGAAAAGACTCAGGCCAAGACCTTGCCGGTGGGCACCCTGATTT
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| Amino Acid Sequence |
>glycyl-tRNA synthetase subunit beta
MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITALATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGV ELSEIDQSGPKLRYSQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQIIDCTILAQKAGRESRGHRFHHPQSVRIGSPSS YLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEAFNDRLQNVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLNDAVA FAVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTEVQAKY FDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALREPVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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