Pseudomonas aeruginosa PAO1, PA0009 (glyQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02091
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02091
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02091
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02091
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02091
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class
Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded
PseudoCAP Aminoacyl-tRNA biosynthesis ECO:0000037
not_recorded
PseudoCyc TRNA-CHARGING-PWY tRNA charging 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30075 GLYCYL-TRNA SYNTHETASE IPR006194 Glycine-tRNA synthetase, heterodimeric 8 303 0.0
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 253 269 1.9E-69
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 164 179 1.9E-69
Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. IPR002310 Glycine-tRNA ligase, alpha subunit 9 293 61.704315
Gene3D G3DSA:1.20.58.180 Class II aaRS and biotin synthetases; domain 2 - - 217 296 8.9E-33
Gene3D G3DSA:3.30.930.10 Bira Bifunctional Protein; Domain 2 IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) 2 216 3.5E-121
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 63 78 1.9E-69
NCBIfam TIGR00388 JCVI: glycine--tRNA ligase subunit alpha IPR002310 Glycine-tRNA ligase, alpha subunit 10 299 0.0
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 84 104 1.9E-69
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 115 139 1.9E-69
SUPERFAMILY SSF55681 Class II aaRS and biotin synthetases IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) 10 291 0.0
FunFam G3DSA:3.30.930.10:FF:000006 Glycine--tRNA ligase alpha subunit - - 2 216 8.5E-124
Pfam PF02091 Glycyl-tRNA synthetase alpha subunit IPR002310 Glycine-tRNA ligase, alpha subunit 11 291 0.0
PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature IPR002310 Glycine-tRNA ligase, alpha subunit 141 161 1.9E-69
CDD cd00733 GlyRS_alpha_core IPR002310 Glycine-tRNA ligase, alpha subunit 10 292 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.