Pseudomonas aeruginosa PAO1, PA5562 (spoOJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAATGGACATGAAGGAAAATCGCCTGCGCAACGCGCTGGCGCCGATCCGCGAGAACTACGACTACATCCTCATCGACTGCCCGCCGTCGCTGTCGATGCT CACCGTCAACGCGCTGACCGCCGCCGACGGCGTGATCATCCCCATGCAGTGCGAGTACTACGCGCTGGAGGGGCTGACCGACCTGATGAACAGCATCCAG CGCATCGGCCAGTTGCTCAACCCGACGCTGAAGATCGAGGGTCTGTTGCGGACCATGTACGATCCGCGCATCAGCCTGACCAACGATGTCTCCGCGCAGT TGCAGGAGCATTTCGGCGACACCCTCTACAGCACCGTCATCCCGCGTAACGTGCGCCTCGCCGAAGCCCCCAGCTTCGGCATGCCGGCGCTGGTTTACGA CAAGCAATCCCGCGGCGCCATCGCCTACCTGGCGCTGGCCGGCGAGCTGGTCCGCCGCCAGCGCGCCAAAGGCCGCGCCGCAACCGCATAAGGAACCCGC
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| DNA Sequence for Gene |
>PA5562
|spoOJ
ATGGCAGCCAAGAAACGTGGACTGGGACGCGGGCTCGATGCCCTGCTGGGCGGCTCGAGTCCCGCCAAACTGCAGGAGGAAGCCGTACAGGCCGACCGCC GCGAGTTGCAGCAGATCCCCCTCGACCTGATGCAGCGCGGCAAGTACCAGCCGCGTCGCGACATGGACCCTCAGGCGCTGGAGGAACTGGCGCAGTCGAT CAAGGCCCAGGGCGTGATGCAGCCCATCGTGGTGCGGCCGATCGCCAATGGCCGCTACGAGATCATTGCCGGCGAGCGGCGCTGGCGGGCCAGCCAGCAG GCCGGACTGGAAAAGATCCCGGCGCTGGTGCGCGACGTGCCGGACGAAGCGGCCATCGCCATGGCGCTGATCGAGAACATCCAGCGCGAGGACCTCAACC CGATCGAGGAAGCCGCTGCCCTGCAGCGCTTGCAGCAGGAGTTCCAGCTGACCCAGCAGCAGGTCGCGGAAGCGGTCGGCAAGTCGCGCGCGACCATTAC CAACCTGCTGCGCCTGATCGGCCTGCCGGAAGAGATCAAGACCCTGCTTTCCCATGGCGACCTGGAGATGGGCCATGCCCGTGCGCTCCTCGGTCTGCCG GCAGAACGGCAGGTGGAAGGGGCGCGACATGTTGTCGCACATGGGCTGACCGTACGTCAGACCGAAGCCCTGGTTCGGCAGTGGACGCATGCCCCTGGCA AGCCTGCGGGACCGGTCAAGAGCGACCCGGACATCGCCCGCCTGGAACAGCGCCTGGCCGAGCGCCTGGGCGCTTCGGTGCAGATCCGGCATGGTCAGAA GGGCAAGGGACAGTTGGTCATCCGCTACAGCTCCCTGGATGAACTGCAGGGCGTTCTCGCCCACATCCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACACTTTGGGTTGTAGCGGGTAGTCGGAAATCACTACCAGCCAGTTGAACAGGGGGGACTCCCCCCCTATACTCTGCGCGCTATTTTGTGGGCACTTTT TATGCCAAGTCGTTGATTTGGCAGTGCCGACACCAGAAGACTGAGAGCGCGATGGAGTCCCGCATGCCAAGTCGCCTGCCGGCATTCAGATTGCTGCTCG TCCAACTGGTAGTAGTGCTTGTTGCTGCGATCTCCCTGTGGATTTCTTGGGGACCGGTAGCCGGATATTCCGGACTGCTGGGAGGGATGATCGCCTGGTT GCCGAATTGTTATTTCGCCTACAAGGCGTTCCGTTTCAGCGGAGCGCGGGCTGCCCGGGAAATCGTTCGCTCTTTCTATGCGGGCGAAGCCGGGAAACTG ATTCTGACGGCGGTGCTCTTCGCACTGGCGTTCGCAGGCGTGAAGCCACTGATGGCGCCGGCTCTGTTCGGTGTCTATCTGCTGACCCTGATGGTCAGCT
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| Amino Acid Sequence |
>chromosome partitioning protein Spo0J
MAAKKRGLGRGLDALLGGSSPAKLQEEAVQADRRELQQIPLDLMQRGKYQPRRDMDPQALEELAQSIKAQGVMQPIVVRPIANGRYEIIAGERRWRASQQ AGLEKIPALVRDVPDEAAIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVGKSRATITNLLRLIGLPEEIKTLLSHGDLEMGHARALLGLP AERQVEGARHVVAHGLTVRQTEALVRQWTHAPGKPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRYSSLDELQGVLAHIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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