Pseudomonas aeruginosa 39016, PA39016_000690011
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 291 | 531 | 9.26756E-111 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 113 | 268 | 2.4E-19 |
| FunFam | G3DSA:3.20.20.450:FF:000001 | Cyclic di-GMP phosphodiesterase yahA | - | - | 286 | 540 | 6.2E-89 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 85 | 535 | 0.0 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 122 | 277 | 1.65E-36 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 286 | 540 | 1.3E-97 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 291 | 536 | 1.15E-87 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 112 | 285 | 1.8E-41 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 106 | 275 | 9.8E-39 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 285 | 531 | 7.1E-110 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 118 | 267 | 1.2E-31 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 120 | 267 | 7.51231E-36 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 291 | 526 | 3.1E-73 |
| Coils | Coil | Coil | - | - | 279 | 299 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.