Strain | Pseudomonas aeruginosa 39016 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCTTCAGCAGCTTGGAGCCCAGCAGGCTCTTCAGCGAGCGCATCAGCCGGCCCTCGTAGCCCTCCAGGTACTCGCCTAGCGCCTGGCGGCCGTAGACCG GGCGGCGCTCCTCGACGTTGAAGAACACCACCGAGGGCAGGGTGATCTTGCCGTCCTCCAGCTCGATCAGCGGTTCGACCTCCGGCCGCCACCAGCCGAC GGTGGAGTTGGAGGTGCCAAAATCGATGCCCAGGGCGCGGGCGGCGGTGCTCGGGTTCATGGCGCGAAACGGTCCGGGAAAAAAACGGCCGCGCAGTGTA TGCGAGAGCGTCGCGGATTTCACCGCCGGCGATCGGCAGGAAGCGTCCTGGTACGTCCGTGCGGGCCGCCCCGACCTTTGTATACGGATTTGCCAAGGGG CCCGCGCATGGTGCTATGTTGGCGCTGCTTTCCCACTCCGTCTTGCCGTGTTGTCCTGGATTTCGTCATGCATAGAGCCTCACACCATGAGTTGCGTGCG
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DNA Sequence for Gene |
>PA39016_002120002
ATGTTTCGCGCGCTGTTGGACTCCTCCCGTTGCTACCACACCGCTTCCGTGTTCGATCCCATGTCGGCGCGCATCGCCGCCGACCTCGGCTTCGAGTGCG GCATCCTCGGCGGTTCGGTGGCTTCCCTGCAGGTCCTGGCGGCGCCGGACTTCGCCCTGATCACCCTCAGCGAATTCGTCGAGCAGGCCACCCGCATCGG CCGGGTGGCGCGCCTGCCGGTGATCGCCGACGCCGACCACGGCTACGGCAACGCGCTGAACGTAATGCGTACGGTGGTCGAACTGGAGCGCGCCGGAATC GCCGCGCTGACCATCGAGGACACCCTGCTGCCGGCGCAGTTCGGGCGCAAGTCCACCGACCTGATCTGCGTCGAGGAAGGCGTCGGCAAGATCCGCGCGG CCCTGGAGGCGAGGGTCGACCCGGCGTTGACCATCATTGCCCGGACCAACGCCGAACTGATCGACGTCGATGCGGTGATCCAGCGCACCCTGGCCTACCA GGAAGCCGGCGCCGATGGCATCTGCCTGGTCGGCGTGCGCGACTTCGCCCACCTCGAGGCGATCGCCGAGCACCTGCACATCCCGCTGATGCTGGTCACC TACGGTAATCCGCAACTGCGCGACGACGCCCGCCTGGCGCGGCTCGGCGTGCGTGTCGTGGTCAACGGCCACGCCGCCTATTTCGCCGCGATCAAGGCGA CCTACGACTGCCTGCGCGAGGAGCGCGGGGCGGTGGCCTCGGACCTGACCGCCTCGGAGCTGTCGAAGAAGTACACCTTCCCCGAGGAATACCAGGCCTG GGCCCGCGACTACATGGAAGTCAAAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGACCTCAGGCCAGGCGCTGGCGCAGCGCCTGGTACAGCGGCAGGTCGCGTTCGTACTGGCCGGGAACCAGGGCGTGGCGGTGCTCGGCGAGCATGCCC AGGTAGTCGTCCACCGCCGTGCGGTAGCTGGCCAACTGGTCGGTGGCCAGGGGCTGGCCGGCCATGGCGCGGATATCGAAAGCCCATTGCAACCCGTCGC GGGCGTTCGAATAGGCGGCGCCGTCCATGCCGGCGGTGAGCGCCAGCCACTGGTCGAGGAAGGCCTGCGGTGCGTCGCGCGGGGGGAAGTGGCGGATCTT CGCGGCGCCCACCTCGGTGATGCCGTCGCCGTCCAGGTCGACGCTGTAGCCTTCCGGCAGCAGCAGGTTGCGCGCGCCTTCCTCGCTCAGCGCCTCGACC CGGATCGGCTCGGCCAGGCCCATGTTGCGCTGCAGCGCCTGCAGGTCGTCGGCGCCCAGGCGGGCGAGGAAGCCGCGGGCGTCCAGTTGCGCGCCGTTTT
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Amino Acid Sequence |
>oxaloacetate decarboxylase
MFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGI AALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVT YGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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