Pseudomonas aeruginosa 39016, PA39016_000840042

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008716 D-alanine-D-alanine ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.20 - - - 8 100 9.3E-29
PIRSF PIRSF039102 Ddl/VanB IPR005905 D-alanine--D-alanine ligase 17 65 7.6E-8
PIRSF PIRSF039102 Ddl/VanB IPR005905 D-alanine--D-alanine ligase 58 318 1.6E-82
FunFam G3DSA:3.40.50.20:FF:000013 D-alanine--D-alanine ligase - - 16 100 3.1E-35
Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. IPR005905 D-alanine--D-alanine ligase 19 315 35.03056
SUPERFAMILY SSF56059 Glutathione synthetase ATP-binding domain-like - - 113 312 7.78E-59
PANTHER PTHR23132 D-ALANINE--D-ALANINE LIGASE - - 13 316 2.6E-68
NCBIfam TIGR01205 JCVI: D-alanine--D-alanine ligase IPR005905 D-alanine--D-alanine ligase 20 313 2.3E-109
SUPERFAMILY SSF52440 PreATP-grasp domain IPR016185 Pre-ATP-grasp domain superfamily 20 112 5.08E-30
FunFam G3DSA:3.30.1490.20:FF:000007 D-alanine--D-alanine ligase - - 127 192 1.0E-20
FunFam G3DSA:3.30.470.20:FF:000008 D-alanine--D-alanine ligase - - 158 311 6.8E-41
Pfam PF07478 D-ala D-ala ligase C-terminus IPR011095 D-alanine--D-alanine ligase, C-terminal 120 311 3.6E-57
Pfam PF01820 D-ala D-ala ligase N-terminus IPR011127 D-alanine--D-alanine ligase, N-terminal domain 68 102 1.8E-10
Gene3D G3DSA:3.30.470.20 - - - 101 314 3.3E-50
Gene3D G3DSA:3.30.1490.20 - IPR013815 ATP-grasp fold, subdomain 1 128 192 4.0E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.