Strain | Pseudomonas aeruginosa 39016 chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGGTCCTGCTCGCGCTGGACGCCATGATCCTCGAGCACGAGCGGGACTACCGCGGCACGCGCCTGGAGTGGTGTGCGGTGGCGGACGTTTCCCACTAT GCGCTGATGGCGCTGTCGCTGCTGACCGACACCATCGACGGGCTCACGGTCCACGACGAGACCATGGCGCGGACGGCGAATGCATACAGCGATGCGATCT GTACCGAGGCGTTCGTCTTCGAGATGGCCAAGCAACTGGGCAAGAGCAGCGCTTACGAAATCATCTTCGAGATCACCCAGGCCTGCCAGCGCAAGCGGAT TCCGATGCGCCAGGCGCTCGAGTCGGATCCGCGGGTGGGCGCCGTCATGCCGAAGGAAACCCTGGCCAGGCTGTTCGAGCCGCGGACCCATCTCGGCATG GCCGGGACCATCGTCGACAAGGTGTTGGACAAGGTCGCCAGCCACCACTGAATCACCCGCCGCCAGAGGCGGCGGTACTGCACATCAACGGAGAACAAGA
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DNA Sequence for Gene |
>PA39016_001560005
ATGACAAAGGCTAACGAGATCGAAACCGCGAAGGTCAAGCAGTTTTCAGCGCGGATCATGGAGGACTACGGCAATACCCTGCGCGGCGCGATGCTCTACA TCGGCGACCGCCTGGGGCTGTTCAAGGCGCTCGCCCATGGCCAATGGGTGACCCTGGAGGAGCTGGCGCAGCAGACCGGCTACACCACCCGCTACCTGCG CGAATGGCTGGGCAGCATGGTCACCGGCAACTACCTGGCCTACGATCCGCAGAGCAGGAGCTATCGGTTGCCGGCCGAGTTCGTCCCGGTGCTCGCCGAC GAGGACTCGCCTTATTTCGCCGGCGGGATCATCCAGTTGAGCGTGCCCTTCGTGAGCATGGCGCCGAAGATCATCGAGGCCTTCCGCTGCGGCGGCGGTT GCCCCGAGGAATCCTTCCCGCTGGAAACCTGGGAAGGCATGGAGCGCATGACCATGCCCTGGTACAAGCACTTCCTCGTGCAGCACTGGATTCCTTCGCT GGATGGCGTCAAGGAAAAGCTCCAGGCGGGTGGCAGCGTGCTCGATTTCGGCTGCGGCAGCGGGCTGGCCGCGATCATGATGGCCAAGGCGTTCCCCGAA GCCCAGGTCTATGGCTGTGACTTCCACGCGCCGTCCATCGAACGCGCGCGGGCGAACGCCGAGGCTGCGGGGGTCGGCGACCGGGTGCGCTTCGAGGTCA GCGATTCCGATGCGCTGGCGGGCAAGAAGTTCGACTTCGTCACGACCTTCGTGGTCATCCACGACGCGACCGACCCGCAGCAGATGATGAAGGACCTGCG CGAGTCGACCGCCGACGATGGGACCTACCTGATGGTGGAACTCAACCTGTCGCAGGAACTGCACGAGAACATGAACCTGTTCGGTCGCGTGATGTACCCG CAGAGCACGCTGTATTGCATGACCTGTTCGCTGTCCCACGGCGGCGAGGGTCTCGGCGCCTTCATGGGCGAGGACCGCGCGCGGCAGATGGCCGAGGCCG CCGGCTTCAGTCGCTTCCGCAAGGTGCCTTCGGAGTGGCCGCCGCTGCCGGCGCTGTTCGAACTGCGACCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGCGTTATCTGGGACGGCCGGGACGGCAACCGTTGGATAGCGGTTGCCGTGGCCGCCGCCCGGCGCGTGCCGGCTGGGCATGGCGGTCTCGGCTCGATC GCACTGGTGTTCAGGCCCGCTTCGGCGGGCTTTTCATGGCCGCCGGAAAAACGAAGCCCCGCCAATTGCGGGGCTTGCTTGCGGTGTGGACGGCGCTGCT CACAGGTCGAAGTCGTAGTCCGACAACTGGCGCTGCAGGCGGCGTTCTTCCAGCAGGTTGTCGATGATGCGACGCTTGGTCAGGTTGGTCTTGGCCACCT CGACGCTGGTTTCCTCGCCGTCATCCTCTTCAACGCCGGCTTCGTCGTCGATCTCGAGTTCTTCTTTGGCTTTTGCCATGACATTCACTCCAACTTATGG GGTGGTAATGGCGCACCTTATAGCGACAAAGCCGTGGCTGGTAAAAAAGATTTTTTCAATCGTAAAGATAGGATTTCGAATAGTTGATCAATCGTCTGAA
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Amino Acid Sequence |
>hypothetical protein
MTKANEIETAKVKQFSARIMEDYGNTLRGAMLYIGDRLGLFKALAHGQWVTLEELAQQTGYTTRYLREWLGSMVTGNYLAYDPQSRSYRLPAEFVPVLAD EDSPYFAGGIIQLSVPFVSMAPKIIEAFRCGGGCPEESFPLETWEGMERMTMPWYKHFLVQHWIPSLDGVKEKLQAGGSVLDFGCGSGLAAIMMAKAFPE AQVYGCDFHAPSIERARANAEAAGVGDRVRFEVSDSDALAGKKFDFVTTFVVIHDATDPQQMMKDLRESTADDGTYLMVELNLSQELHENMNLFGRVMYP QSTLYCMTCSLSHGGEGLGAFMGEDRARQMAEAAGFSRFRKVPSEWPPLPALFELRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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