Pseudomonas aeruginosa 39016, PA39016_002990007
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.3720.10 | - | IPR035906 | MetI-like superfamily | 129 | 334 | 4.0E-18 |
| CDD | cd06261 | TM_PBP2 | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 139 | 326 | 1.33883E-16 |
| Pfam | PF00528 | Binding-protein-dependent transport system inner membrane component | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 157 | 337 | 3.0E-25 |
| PANTHER | PTHR30325 | MEMBRANE COMPONENT OF ABC TRANSPORTER | - | - | 4 | 337 | 0.0 |
| SUPERFAMILY | SSF161098 | MetI-like | IPR035906 | MetI-like superfamily | 135 | 321 | 1.44E-17 |
| FunFam | G3DSA:1.10.3720.10:FF:000005 | Microcin C ABC transporter permease | - | - | 129 | 333 | 2.5E-108 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.