Pseudomonas aeruginosa 39016, PA39016_004070005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 39016 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGAAGACCATCGACCGGGTGGTCGACGTGTTCCCGGCCGAGGAAAAGGCCATGGTTCGCTCGATGCTCTCCGAGTCGCTGCAATCGGTGATCTCGCA GACCCTGATCAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATCCGCAACCTGATCCGCGAGGACAAGGTCGCG CAGATGTATTCGGCGATCCAGACCGGCGGCTCGCTGGGCATGCAGACCCTCGACATGTGCCTCAAGGGCCTGGTCGCCAAGGGCCTGATCAGCCGCGAGA ACGCCCGCGAGAAGGCGAAGATCCCGGAAAACTTCTGATCCTGGCGCCGATCCGCCGCGCTTCGCCCGAATCCCGGAACTGCGTCTAGGATTCAAGAGCG GGAGAGCGGTACCGTAGGCGCATTCCTACCTATCCTTGCCGGCGAGCGCGTCCAGCGCCCGCTCGCCCGCATCCGGCTCGCCGTCGCGGCGCGCCCCTGA
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| DNA Sequence for Gene |
>PA39016_004070005
GTGAGCGAGAACATCATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTCGATGA AGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCGTGATGAACGAGCAGCAGCGCCGCGA TTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGCTTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTA TTGCGCCGGATCGAGACCAACATCCCGACCCTGGAAGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCG TCGGCGCCACCGGCACCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAATTCCACCGGGCACATCATCTCCATCGAGGACCCGAT CGAGTACATCCACCAGCACCAGGGCTGCATCGTCACTCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGTGGCGCTGAAGAACACCCTGCGCCAG GCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACGCCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGC ACGCGAACAACGCCAACCAGGCGCTGGAGCGGATCATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGC CATCGTCGCCCAGCAACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGATCCGC AAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCGCTGTACCAGCTCTACACCCAGGGCG AGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCTGATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAG CCTGACCCAGGGCCTGAGCCTGGAAATCACCGACGACGACCCTGCCGGCCGGCGCTTCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGCCTTCAGTAGGCCAGCGGCTCCTCGGCCTGGGCGCAGGCCGAGGTTTCCAGTTGCAGGGTGCTGTGTTCGATCTCGTAGCGGTCGTGCAGCAGCGC CTTCACCGTTCCCAGCAGCGTCTCGGCGTCGACCAGGGCCGGGTCGTAGACCAGATGGCTAGTCAGGCTGATCTTGCCGCTGGTGATCGACCACACATGC AGGTCGTGCAGCCCGGTCACGCCGGGAATCCCCAGCAGCGCTTCGCGCAGCTCGGCCAACTGGATTTCCTTCGGCACCCCTTCGAGCAACACATGCAGGC TCTCGCGCAGCAGGATCCAGGTGCGCGGCAGGACCCAGAAACCGATCAGCACCGCCACCAGCGAGTCGACCCAGGCCCAGCCGGTGAAACGGATCACGAT CGCGGCGACGATCACCCCCAGCGAGCCGAGCATGTCGCTCCAGACCTCCAGGTAGGCGCCCTTGACGTTCAGGCTGTTGCCCTGGGCCGGCGCCAGCAGG
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| Amino Acid Sequence |
>twitching motility protein PilT
MSENIMEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGRFRVSAFYQRNLVGMV LRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIEDPIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQ APDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERIIHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIR KGEVHELKPLMKRSTEQGMQTFDQALYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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