Pseudomonas aeruginosa 39016, PA39016_004160014

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 7 212 2.0E-59
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 57 75 4.1E-25
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 7 357 1.15E-108
PRINTS PR00145 Argininosuccinate lyase family signature - - 52 72 1.7E-12
NCBIfam TIGR02426 JCVI: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase-like 5 260 1.4E-112
PRINTS PR00145 Argininosuccinate lyase family signature - - 187 203 1.7E-12
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 187 203 4.1E-25
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 1 274 1.1E-96
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 276 353 8.0E-20
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 7 359 2.0E-104
Coils Coil Coil - - 250 270 -
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 12 30 4.1E-25
Gene3D G3DSA:1.10.40.30 - - - 275 361 1.9E-30
PRINTS PR00145 Argininosuccinate lyase family signature - - 11 33 1.7E-12
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 275 354 5.4E-29
CDD cd01597 pCLME - - 2 356 0.0
FunFam G3DSA:1.10.40.30:FF:000007 Adenylosuccinate lyase - - 275 356 6.0E-24
PRINTS PR00145 Argininosuccinate lyase family signature - - 142 166 1.7E-12
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 142 169 4.1E-25
Coils Coil Coil - - 27 54 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.