Strain | Pseudomonas stutzeri KOS6 scaffold4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCAATAAGTAGTTAAGTCGCGGTCCCCAGAGCGGACCGCGCGTTGTTGCCCGCCAGGCCGCCCCCGTCACGTACATGCGTACGCTCAGGGGCTCCGACC TGTCGGGCGCCTTGCGCTGCCACGCTCTGGAAACCGCTCGCAGCGAGCTGCTGCTGAAAAGCGCTGCGTCGAGGCTTGAGGGCAACACCGACCCTGTAGG AGCGAGGGGGACGCCTAGTCCTTGCTCGCGATCCACTATCCGCCAACTCCCGATCCGAGTTAGTGCAATAGCCAGAGGCCAGCCCTGATCCAGTCCCCTC GCCCCTCCGGGGAGAGGGCTAGGGTGAGGGGCAGCCCACCAGACAACACAAAGGCCGGGCCCAAACCTCGACCTGATACAGAACACAAAGGGCGCGGGGC ACCACCACCCTCCCCAACCAAACACCCGCTTTTGCGTGCAAACCAAAAGCCCAAACATTTCCGACCGGCCATGACCGGTCCCCAATCAGGAGAAACCACC
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DNA Sequence for Gene |
>B597_010750
ATGCTGAGCTGGGACGAATTCGACGAAGAAGAAACCACCGCAACACCGGCCGCCGCACAAGCCGCCGCTGCCGCCAGCAACGAAGCACCGGTCAAACTCG ACCAGGACGCCGCCGGCTCCGTCGAAGAAGCCCGCGCCGTTGCCGCCGACGACTCCGACGCCATCGCCCGCGCCAAGCGCGCGCTGGACGACCTGGACAT CCAGGAAGGCCTCAACGAACTGGAAGGCGAATCGGCCCGCGTGCGCGTCGACGAAAAGCGCATGATCAACGCCCGCGCCGACCTCAACCAGCTCGTCCCC TTCAAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCGCAGGAAGTGAACATGAACGCCGACATTGCCCTGTGGAAGA GCAAGGACGGCCTCAGCGAAGACGAGCGCCGCATCGTCAAGCGCAACCTCGGCTTCTTCTCCACCGCCGACAGCCTGGTCGCCAACAACCTCGTGCTGGC CACCTACCGCCTGATCACCAACCCCGAATGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAG TCGCTGGGCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGAGCGTCGCGAAAAAGGCCAGCTGGGGCCTCAAGTACACCCGTTCCATCT CCGACCCGACCTTCCAGACCGGCACCCCGGAGACCGACAAGCAGTTCCTGCGCAACCTCATCGCCTACTACTGCGTGCTCGAAGGCATCTTCTTCTACTG CGGCTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAGTCCATGCACCTGAAC TTCGGCATCGACATGATCAACCAGATCAAGATCGAAAACCCGCACCTGTGGGACGCCGAGATGAAGGACGAAGCGACCCAGATGATCCTCCAGGGCACTC AGCTCGAAATCGAATACGCCCGCGACACCATGCCCCGCGGCGTACTGGGCATGAACGCCGCGATGATGGAGGACTACCTCAAGTTCATCGCCAACCGCCG CCTGACCCAGATCGGCCTGAAGGAAGAGTATCCGGGCACCACCAACCCGTTCCCGTGGATGAGCGAGATCATGGACCTGAAGAAGGAGAAGAACTTCTTC GAGACGCGGGTGATTGAGTATCAGACGGGTGGGGCTTTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCCGGAAACTCACTAAAGAGATTAAGAGCGCTTTACCTGAAATGGATGTTTGGGGTGGCGAGTAAAGACTTGAAGCCCCGCCCAGTGCGGGGCTTATTT TTTGGAGTTACTTAATGACAAAAGAATATTTCGTCGAAGAAGTCTTTGTTCCTGGTGGAATGCCCAAGTTCACATATATCTCAAGAGCCAAACTCACACT TGAAAAAGACTTACAAAAAGTCTCTAGAAATCTATGCAAGCTCGTCACCCTAACAGGCTCCACAAAATCCGGAAAAACTGTACTTACCAATAAAATATTC CCACGAAGCAATCCAAAAAATATTTGGATAGATGGAGGTTCTATATGTGAAGAAAATGACTTCTGGTCATTTATTCTTGAAGCCCTACATGAATATACTT CTCACGAAGAATCAACAACCAGCGAGTCAAGCAGCTCTATATCCGGAGATGCCACTGGGGAAATAGGTGTTCCATTACTTGTTAAAGGCAAAGGAAAGAT
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Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDEEETTATPAAAQAAAAASNEAPVKLDQDAAGSVEEARAVAADDSDAIARAKRALDDLDIQEGLNELEGESARVRVDEKRMINARADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFQTGTPETDKQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLN FGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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