Pseudomonas stutzeri KOS6, B597_021705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATATCGACCACCTCGTCGCTCAGCACCAGATCCACAACGATGGCCGGGTAGCGGGCGCTGAACGTGGCTATCAGCGGCAGGATCGACAATCGCCCATGCG CCAGCGCTGCACTGACCCGAAGCCGTCCGCGTGGCACACCCTGATGGGTGATCGCGTCTTCCACCTCGGCCATGTCGGCAAGAATCCGCCGAGCTGCGCG CAGGTAGGCCTCGCCTTCGGCCGTGAGCGTGATGACTCGGGTAGTGCGTATCAGCAGGCGGGTGCCGATGCGCCGCTCGATGCGCGCGATGATCCGGCTG ATGGACGATGGCGTCATGCCCAAGGCACGTGCGGCAGCCGAAAGGCTGCCTTCCTGCGCGACGATGGTGAATACCTCCATCTCACCCGAACGCCCACTGA TATCCATTTGTGCCTCCTGCGCAAAGGTATTGGCCCTGAACTGGGGCTATCGCCAAAAACTGCCCGATCGTAGCATTCGATTCACAAATCAGGAGCCACC
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| DNA Sequence for Gene |
>B597_021705
ATGCGTATCAATCCACCGCTTGTAGCACTTTCCATCGGCGCCTTCGGCATCGGTGTCACCGAGTTCGCCCCGATGGGCATGCTGCCTGGCATCGCCGCCG ATCTCGGCGTGTCGATTCCCATGGCCGGCCTGTTGGTCAGCGCCTATGCCATGGGCGTTCTGATCGGCGCACCGTTGATGACCCTGGCCACCGCCAGGGT GCCGCGTCGTTATCTGCTGATTGGCCTGATGGCCATCTTCACCCTGGGCAACCTGCTGTCGGCGCTGGCTAGCGATTACCAGACCCTGCTCGCGGCACGT GTGGTCACCTCGCTGAACCATGGCGCGTTCTTTGGCATCGGCTCGGTCGTCGCAGCCAGTCTGGTGCCGCCTGACAAGCGCGCCGGCGCGGTCGCAGCCA TGTTCATGGGGCTGACGCTCGCGACCATTGGCGGGGTGCCACTTGCCACTTGGTTCGGCGAAACCTTCGGCTGGCGGTCGGCGTTCTTTGGTATCGCCGG CCTCGGCGCGGTGGCGATGGCGTCGTTGTGGTGGGCCTTGCCTGACGTTGCCGCACCAAGAGGCGACGGCATGCTGGCGGAAATACGAGTGCTCGGGCGC GGGCCGGTATTGTCGGCGCTGGCACTGACAGTGGTGGGCTCCAGCGCAATGTTCACCGTGTTCACCTACATCGCGCCAATCCTGCGCGACGCTACGCAGG CATCGACCAACTTCGTCACCGTAATGCTGGTGCTCTTCGGTGTCGGCCTGACCCTCGGCAATATCTGGGGCGGCAGAGCTGCGGACCGGTCGATCGACCG CACCTTGATCCTTTCGCTTGTGGTGCTGATCATCGTGCTGGTCGCGTTCTCGGTGCTGATGCGATGGCCAGTGCCGGCCGCCATGGCGATCCTGCTCTGG GGGGCTGCCAGTTTTGCCTTGGTGCCGCCCTTGCAGATGCGCGTCATGGAAGCGGCGAAGGACGCGCCCAACCTTGCGTCCGCCGTTAACATCGGTGCGT TCAACTTCGGTAACGCGATTGGCGCTGCGCTGGGCGGCGCGGTCATCAATGCGGGCCTGGGATATCCGGCGATCTCGCTGGCGGGCGCGGCTATGGGCGG GGTAGGCCTGATGATGGTGCTGGTCATGAGCTGGCGTACGAAACGCGGGATGCGGCAGGTTTGTCCCGCTATGGCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGGAACCGATATCGAGCGGCCGGGCGCTCGCATGCAGCGCTTTGGTGGAGTGAACGTGTCCGTAATCGGAGAGGGGTACGCCTGATCCAGAGGAGTAG CGGCTGTCCTCGGACCAGGCTGGTAGTCTGCTTCCTGGTCCCGGTTAACCAGAGCGCTTTATGCAGAACCTCGCCCAGTTACGGGCCATCATCGCTGCCG ACCCGGCGCGCATGCGGATTCTTCGTCGGATAAAGGAACTCGGCCTTGCGGATTGCTGGGTGGCCGCGGGATTCGTGCGCAGTGCGGTATGGGATCATCT GCACCGGCGTGGTAGCAGCCCTCTGCCGCCGGACATCGACGTCATCTGGTTCAATTGCGAGCTGGCTAACGGGGAAATGGATGTCGAGATCGAGGCTGCC TTGCGGTGCTCGGACGATACGCTCAACTGGTCGGTGAAAAACCAGGCGCGTATGCATCTTCGTAATCACGATCAAGCTTACACTTCGGCGCTGGACGCAA
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| Amino Acid Sequence |
>major facilitator family transporter
MRINPPLVALSIGAFGIGVTEFAPMGMLPGIAADLGVSIPMAGLLVSAYAMGVLIGAPLMTLATARVPRRYLLIGLMAIFTLGNLLSALASDYQTLLAAR VVTSLNHGAFFGIGSVVAASLVPPDKRAGAVAAMFMGLTLATIGGVPLATWFGETFGWRSAFFGIAGLGAVAMASLWWALPDVAAPRGDGMLAEIRVLGR GPVLSALALTVVGSSAMFTVFTYIAPILRDATQASTNFVTVMLVLFGVGLTLGNIWGGRAADRSIDRTLILSLVVLIIVLVAFSVLMRWPVPAAMAILLW GAASFALVPPLQMRVMEAAKDAPNLASAVNIGAFNFGNAIGAALGGAVINAGLGYPAISLAGAAMGGVGLMMVLVMSWRTKRGMRQVCPAMAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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