Pseudomonas stutzeri KOS6, B597_017115 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCATGTACCACCACTGCACCAGAAACAGCAGCAAGGCCCCGAGTCCGATGCCGAACTTGCCCAGCAGGCCGAAGGTGGTGAACAGCGCCAGCAGTATGG CGCCGCGAATCGCCAGGTCCACGGCGAAGGCCAGCGCCCGCGGGACGAGGCCGGCCGGGCGCAACAGCAGGTCGATGCCTTCGGGGGTTTCCACGCGGAG GCGGTTATCCAGCAGGGGTGGTGAATCGAGAGCTGAGGACAAGGGATACGTCGTCTAGGTGCAGGCAAGGCCGATGCTATGCGGCAGCGGTGCCCACGGC AATGCATCAATCGGTGCAGGCTGGGCGGTGGAGACACATTATGGCCAAATGCCTGCCTCCTTTGTCGGATGTCGTTCGCAGAGTTGCCGCCGAGTGCGTC CGAAGTTCGGCTGTGCTGGCGAGAACCCTGTGCCACGTACGGCGTGCTGTCCGGGTTCGGGCTGGTAGACTGCTGCGCGTCGATCGAGAAGGACCCTCCC
|
|
| DNA Sequence for Gene |
>B597_017115
|sbcB
GTGACCCCAAGCATCTTCTGGTATGACTTCGAAACCACTGGCGTGTCGCCCAGCCGTGACCGTCCGTTGCAGGTGGCGGGTATCCGCACCAATGAAGCGC TCGAGGAAATAGGCGAGCCGCTGAACATCTATTGCCAGCCCGGCGATGACATCCTTCCCCATCCGGCGGCCTGTCTGGTCACCGGAATAGCCCCTGCGAC CCTGCAGCAGAAGGGCCTGTGCGAAGCCGAATTCATCCATCGGCTGCATCAGGAGCTGGCAGCTCCCGGCACCTGTGTCGCTGGTTACAACAGCCTGCGT TTCGACGATGAGGTCACGCGCTACAGCCTGTATCGCAACTTCTATGATCCCTATGCGCGTGAATGGCAGGGCGGTAACAGTCGCTGGGATCTGATCGATC TGGTACGCACCGCTTATGCGCTGCGACCCGAAGGGCTGGCCTGGCCGGAGGAGGATGGCCGGGTCACGCTCAAGCTCGAGCGCCTGAGTGTCGCCAATGG CCTGGAGCATCTGAACGCCCATGACGCCTTGTCCGATGTGCGCGCCACTATCGCCCTGGCCAGGCTTGTTCGCGACCGGCAGCCGCGGCTGTACGACTAC CTCTACAACCTGCGCCGCAAGCAGGCGGTACTCGAGCAGATCAACCTGTTCGAGCCGCTGGTTCACGTGTCTGGGCGCTTTTCCGCCGCTCGGCACTTTC TCTCGGTCGTCCTGCCGCTGGCTTGGCATCCGGGCAATCGCAACGCGCTGATCGTCTGTGATCTGCAGGCCGAGCCGGATCTGCTCTGGAGCGAGTCCGC CGAGGCCTTACGCAAGCGCCTCTATACACGGCATGACCAGCTCGCCGATGGCGAGTTGCCGGTGCCCCTGAAGCTCGTGCACGTCAATCGCTGCCCCGTG CTGGCACCGCTCAAGGTGCTGCGGGCGGCGGACATCCAGCGGCTGGGGCTGGATATGCCGGCTTGTCATGCGCGTGCTGCGCTATTGCGTGAGCATCGAC ACGCCTGGAGCGACAAGCTGGCCGACATCTATCGAGAGGAGGGCTTCAGAGGCAGCGATGATCCGGAGCAGCAGTTGTATGACGGCTTTCTCGGCGAGCG CGACCGGCGTTTGTGCGAGCAGATACGCAACCTGGCGCCAGCCGAGCTGGCCAGGCATCCCTGTCGTTTCGATGATGTGCGTCTGGAGGCGCTGCTGTTT CGCTACCGCGCGCGCAATTTTCCCGCAACGTTATCCGGCCCGGAGCAGTTGCAGTGGCGCGAGTTCTGTCAGCAGCGGCTGAGCGATCCGGCCTGCGGCG CGCCCAATACTCTGGTGCAGTTCGAAGCGGAGATACAGCGGTTGATGAGCACTGCCGCACCCGAGCAACAACGACTGTTGCAACAATGGCGCGAGTACGG ACAGGGGTTATACGAGCGTTATGGCTTGAGCAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTATGGTCTTCAGGCAAGGGCTGGTTGCCCGAGTGCGGCGCTGGCGCTTGCTGCGCAAAACGACTGGTGGTGGGAGGCATGCAAATGAAAAACGCCGTTT CCGGCACTGCTTCTGAGTGTCGAGAAACGGCGTTTCTTATAAAACCGGTATTGCTTAGCCCAGAAGAGTGGCCCAGCTTTCCACGGTATCGGAGCCCCAT TGGGCTTTCCATTCTTTCAGCGTCTTGTGATTGCCGCCTTTGGTTTCAATCACTTCACCACTGTGCGGATTCTTGTACTGCTTTACGCGGCGGGCACGCT TGCTGGTAGCCGGTGCTTTCGCTGCGCGCGGGCTTTTGCCGCTGCGCGAGGCATCCGGATCGAGCAGGGCGATGATGTCACGCAGCGACTTCTGGTATTC GCCCATGAGTTCGCGCAGCTTGCCTTCGAACTCCAGTTCCTTTTTCAGTTTGTCATCTTCGGAAAGGGACTTCAGTCGCTCCTGAAGTTCCTTGATGGCT
|
|
| Amino Acid Sequence |
>exonuclease I
MTPSIFWYDFETTGVSPSRDRPLQVAGIRTNEALEEIGEPLNIYCQPGDDILPHPAACLVTGIAPATLQQKGLCEAEFIHRLHQELAAPGTCVAGYNSLR FDDEVTRYSLYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGLAWPEEDGRVTLKLERLSVANGLEHLNAHDALSDVRATIALARLVRDRQPRLYDY LYNLRRKQAVLEQINLFEPLVHVSGRFSAARHFLSVVLPLAWHPGNRNALIVCDLQAEPDLLWSESAEALRKRLYTRHDQLADGELPVPLKLVHVNRCPV LAPLKVLRAADIQRLGLDMPACHARAALLREHRHAWSDKLADIYREEGFRGSDDPEQQLYDGFLGERDRRLCEQIRNLAPAELARHPCRFDDVRLEALLF RYRARNFPATLSGPEQLQWREFCQQRLSDPACGAPNTLVQFEAEIQRLMSTAAPEQQRLLQQWREYGQGLYERYGLSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|