Strain | Pseudomonas stutzeri KOS6 scaffold3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATTCCACCAGCCAGTTCCTCGGCTCCGGTCTGGGCGGCGTGCTCGGCGGGTTGCTCTACCAGCAGGGTGGGCTGGCGCTGGTGTTCGTCGGCTGCGCTG CATTGTGCGCACTGTGGCTCTTCGTTGTCTTCAGCATGCGCGAGCCGCCGTATGTCACCAGCCTGCGCTTGCCGCTGTCGGCCGGTGCGCTGGCCAATGC CGGGCTCGGAGACGAGCTGCTGCGCGTGACGGGGGTCAGCGATGTGCTGATCGTCGCCGATGAAGCGGCGGCCTATGTAAAGGTCGACACACAGTACCTT GACCGAGACGCCCTGGATCGCCTGGTCGCCTGAGCATCGCAGCCATGGCGGCGACAGATGCGTATCACGGCGCAACTTGAGGGTGCGTCGGTTGGTTGTC AGGGGTGGCTGAGGTAAGATTCTCGGTCATCGGCTTTCCTGGTAGCAGAACCGTTATCGGCGAGCCCACTTCAATTCAATGTTCCAATGAGGAGTTACCC
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DNA Sequence for Gene |
>B597_021660
ATGGCCAGAGGGGTGAATAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAATGCGGTGACCAACATCACGC TGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGTTGCAGGAGCGCACCGAGTGGCACCGCGTCGTGCTGTTCGGCAAGGTCGCCGAGATCGC TGGCGAATACCTGCGCAAGGGTTCGCAGTGCTACATCGAGGGCCGTCTGCAGACCCGTGAATGGGAAAAGGACGGCGTCAAGCGCTACACCACCGAAATC GTCGTCGACATGAACGGCTCCATGCAGCTGCTTGGTGGCCGTGGCGGCAGCTCCGATGATGCGCCGCGCCAGCCACGCCCGCAGCGCGAGCCGCAGCAGG CGCCACGTCCCCAGGCCCAACCGCAGCAGCCGGCTGCAAGGCAGCAGCCTGCACCGGACTACGATAGCTTCGACGACGACATCCCCTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGAACCCCTGAGACTTTTTTGTAAAGTTTCCGTCGAGAACCCCCGCTTAGCGGGGGTTTTCTCGTTTTTAGGGCGTAAAAAATCAGTTGACGATTTTTGG CTAGGCTCATACCTTGAATTTACGTAAGGAATTCGAGGTATTCATGCGGCTATCAGTGAGGAGGTTTCAAACCGAGTCAGGCGAGAGGTTTCTGATTCTC GTTGATGACGCGGGCATGCCTCTCTACTACCCTGCGCTCTTTGTGACAGCGGTTCTGCGTGGGGGAAACCGCGCCATCAATACCATCAGTCATGCCCTCA CAGCCATCAAGCTGCTGTACGCATGGGATGACTACTACTGCGTTGACCTGGAGTCGCGCTTTAAGCGAAGCGAGCTGCTCTTCGAGCATGAGATCCACTC TCTTCGTGATTTCTCGCAGAAGCGCTTGGCTGACACGAAGCCCAATGAGGGCAAGGTCACTTCAATCAAGCGTCGCCAGCGGCTGGTCTCCACCGAAAGC
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Amino Acid Sequence |
>single-stranded DNA-binding protein
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIEGRLQTREWEKDGVKRYTTEI VVDMNGSMQLLGGRGGSSDDAPRQPRPQREPQQAPRPQAQPQQPAARQQPAPDYDSFDDDIPF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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