Pseudomonas stutzeri KOS6, B597_003975 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGTACCGACATGCTCGGGCAGCACGACCACGGTTCGCTCGTTGAGCATGCCGGCTTCGGCGGCTTGCAGAAGGTAGGTTCGAAACTTCAGCTGCAGC CTTTCACGACTCTGGTAATCAGCCGGTTGCAGCCGCGTTTCGATACCCAGCAGGTTGCCATCGGTGCCGGCCTGCCCGCGGCTGTCGATGGGCAGGGTAC GCAGATCGGACAGCAGGGGACCACTGCGACGGTCACGAGTCCAGTCGATGTAGGCCACCAGCGAAGCGCCGGCGAGGAATAGCAGCAGGGCGAGCTTGAA TGAGGTGCGCATTGGATGCGGAGCTGTGATGGACCCTGACAGCCTAGGTAAGGCGATGCCTGTTGCCAAGCGTTTTGCGCTGAATGATCAGAAAGTTGTC ATTTATGATCATTGAGTGCGGCGTTTGGCCTGTTTATCGTCGTCGCATATCCGACCGCAGCCCCATGAGGCTCGGCACCGAAACCGATGAGGATGCACCG
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| DNA Sequence for Gene |
>B597_003975
|fadH
ATGACCGCTTTCCCGAATCTGCTGGCTCCGCTCGATCTGGGTTTCACGACCTTGCGCAACCGCGCCCTGATGGGTTCGATGCATACCGGTCTGGAAGAAA TGCCCAACGGCTTCGAGCGCATGGCGGCGTTTTTCGCCGAGCGTGCCCGTGGTGGCGTCGGCCTGATCGTGACTGGCGGCGTAGGACCCAACGAGGAAGG TTCGGTGCGTGCCGGGGCGGCCAAGCTCTCCACGTCTGAGGAGGCCGAGGAGCACAGGATCGTCACGCAGGCGGTGCACGAGGCGGGCGGCAAGATCTGC ATGCAAATCCTGCATGCCGGCCGTTACGCCTACAGCCCGCAGTTGGTGGCACCGAGCGCGATCCAGGCGCCGATCAACCCGTTCACCCCGCGCGAACTGG ACGAGGAGGGCATCGAGAAGCAGATTCGCGACTTCGTCAATTGCGCGAGCCTCGCCCAGCGCGCCGGTTATGACGGCGTCGAGATCATGGGATCGGAAGG CTACTTCATCAATCAGTTCCTGGTCGCGCATACCAACCACCGTACCGATCGCTGGGGTGGCAGCTACGAGAATCGCATGCGCCTGCCGGTAGAGATCGTG CGTCGTGTACGCGAAGCGGTGGGTGAGGAGTTCATCATCATCTATCGCCTGTCGATGCTCGATCTGATCGAGGGCGGCAGTGTCTGGGAAGAAGTCGTGC AACTGGCCAAGGCGATCGAACAGGCCGGTGCCACGCTGATCAACACCGGCATCGGCTGGCACGAGGCGCGAATCCCGACCATCGCCACCAAGGTGCCACG TGCCGCCTTCACCAAGGTCACCGCCAAGCTGCGGGGCGAGGTGAGCATTCCGCTGATCACCACCAACCGCATCAATACGCCGGAGGTAGCCGAGCAGGTA CTGGCCGAGGGTGATGCAGACATGGTGTCCATGGCGCGTCCGTTTCTCGCTGACCCGGAATTCGTCAACAAGGCGGCGGCCGGTCACAGCGAGCGGATCA ATACCTGCATCGGCTGCAACCAGGCCTGCCTGGATCATACCTTCAGCGGCAAGCTGACGACCTGCCTGGTCAATCCACGTGCCTGCTACGAAACCGAACT CAACTACATTCCCACCACGACGGTGAAGAAGATCGCCGTCGTCGGTGCCGGCCCGGCAGGGCTCGCCGCCTCGAGCATCGCCGCCGAACGCGGTCATCGG GTGACGCTGTTCGATGCGGCGGGCGAGATCGGTGGCCAGTTCAACGTCGCCAAGCGAGTGCCGGGCAAGGAGGAGTTCTCCGAAACCCTGCGCTATTTCC AGAACCGCCTGCAGGAAACCGGGGTCGAGGTGCGCCTTAACACTCGTGCGACGGTCGAAACGCTGCTGGCGGGTGGCTTCGACGAGATCATCCTGGCCAC CGGGATCGTCCCGCGTACGCCGGACATTCCAGGCGTCGACCACCCGAAAGTGATCGGCTATCTGGATGCGATCCTCGAGCGCAAGCCGGTCGGTCAGCGC GTGGCAGTGATCGGGGCCGGCGGCATCGGTTTCGATGTCTCGGAATACATCAGCCACGATGGCCAGTCCACCAGTCTGGATCGCGAAGCGTTCTGGAAGG AGTGGGGTATCGACCTGGGGCTTTCGGTGCGCGGCGGCATCGCCGGTATCCAGCCGGCGCCGCATGCGCCCAAGCGCCAGGTCTATCTGCTGCAGCGCAA GAAGTCCAAGGTCGGTAACGGGCTGGGCAAAACCACCGGCTGGATTCATCGGGCCGGGCTGAAAAGCAAGCATGTGCAGATGCTCAATTCGGTGGAGTAC CTGCAGATCGACGATGCCGGCCTGCATATCCGGGTAGGCGACGGCGAGCCGCAGGTGTTGCCGGTGGATACGGTCATTCTTTGCGCGGGTCAGGAGCCGC TGCGCGAGCTTCAGCAGGGGCTGGAAGCGGCGGGCGCACGGGTGCATCTCATCGGTGGCGCAGACGTGGCGGCCGAGCTCGACGCCAAGCGCGCTATCAA CCAGGGCTGCCGCCTGGCTGCAGCGCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTTCGGAGGTCGCCGGTGAATGAGGAGAAGGACGCGGGCGCAACCCTGTTGCAGCCGGGTGCTGCGAGCAGCCTGCAGGTCTGGCATCGAATGATCGGC GAGCGCGATCTGAGCCGCCTGCCTGAGCTGTTGCATCCCCAGGCGGTGTTTCACTCACCGATGGCGCACAAGCCCTACGAGGGTGCGGCGGCGGTCAATC TGATCCTCAACACCGTGCTGCAGGTCTTCGAGGAGTTCCGCTACCACCGGGAGCTGGCGAGCGTGCAGGGCACCGATGTCGTTCTCGAATTCAGCGCCCG CGTGGGCAGCCGCGAGCTCAAGGGCATCGACCTGATCCGCTTCGACGAGGCAGGCAGGATCGTCGAATTCGAGGTCATGATCAGGCCGATGAGCGCGCTG CAGGCGCTGGGCGACGAGATGAAGCGTCGCCTCGCAGCCTACGGCGGCGGGTGATTTAGCCAAGCTCATCGCAAATCCGCAGGGCGTCTTGCCGGACGGC
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase FadH1
MTAFPNLLAPLDLGFTTLRNRALMGSMHTGLEEMPNGFERMAAFFAERARGGVGLIVTGGVGPNEEGSVRAGAAKLSTSEEAEEHRIVTQAVHEAGGKIC MQILHAGRYAYSPQLVAPSAIQAPINPFTPRELDEEGIEKQIRDFVNCASLAQRAGYDGVEIMGSEGYFINQFLVAHTNHRTDRWGGSYENRMRLPVEIV RRVREAVGEEFIIIYRLSMLDLIEGGSVWEEVVQLAKAIEQAGATLINTGIGWHEARIPTIATKVPRAAFTKVTAKLRGEVSIPLITTNRINTPEVAEQV LAEGDADMVSMARPFLADPEFVNKAAAGHSERINTCIGCNQACLDHTFSGKLTTCLVNPRACYETELNYIPTTTVKKIAVVGAGPAGLAASSIAAERGHR VTLFDAAGEIGGQFNVAKRVPGKEEFSETLRYFQNRLQETGVEVRLNTRATVETLLAGGFDEIILATGIVPRTPDIPGVDHPKVIGYLDAILERKPVGQR VAVIGAGGIGFDVSEYISHDGQSTSLDREAFWKEWGIDLGLSVRGGIAGIQPAPHAPKRQVYLLQRKKSKVGNGLGKTTGWIHRAGLKSKHVQMLNSVEY LQIDDAGLHIRVGDGEPQVLPVDTVILCAGQEPLRELQQGLEAAGARVHLIGGADVAAELDAKRAINQGCRLAAAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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