Strain | Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTGCAGGATGCGGGCGTCAAGACCGTGCGCTCCCTTGCCGATATCGGCAAGGCGCTGGCGGAAGTGACCGGCTGGGACATGAAGGCCTGATCGGCCTTG AGGCGCCCGGTAATCGCCGGGCGCTTCTGTTCCAGATTTTCTCGGCTGTGGCGCCGATTGGCGGCGCGCAGCATGCAATTGACTATCCGATAAGTTGCGC GTCGTTCATCGTATTTGCTGCATGCGGCGCAATATTTTCGCGACGTATGCTGACGTTCCGCTCAGCATCCATCGCCGCATCGGTGGCATCATTGTCGCCC CATTCATACGTTTGTTCGGTCCACAAGAGCGACGACGTGCAAGAAGGATTCGGCCCAAACGGCTGAATTACGTTTCCCCTTATCCCTGAAGGAAACCCGT ACTCCCATCATTCAGGCCCATATGAAACGTCGACCCGTCGCGCTCGTGAGCTGTGCGTCGCGTTCATTTATGCCGTTGTCCATTTGGTAATTTTTCCTGC
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DNA Sequence for Gene |
>B597_003655
ATGAATCGTTTGAAAGGTTTTGACTTGCTGGCCCTTGGCTTCATGACGTTCGCGCTGTTCCTCGGCGCTGGCAATATCATTTTTCCGCCTAGCGCCGGGA TGGCAGCGGGCGAGTTCGTCTGGCAGGCGGCGCTTGGCTTTCTGTTGACCGGGGTCGGTCTGCCGTTATTGACGGTCGTTGCGCTGGCACGGGTCGGCGG CGGCATGGATCGATTGACCGCGCCACTTGGAAAGGTCGCGGGTACTGTGCTGGCAGTGGCTGTCTACCTGGCGATCGGGCCGCTGTTCGCCACGCCGCGC ACGGCCGTCGTTTCATTCGAGATGGGTATCGCGCCGTTCAGCGGCAACTCCGGGACGCCGCTGTTCATCTATACGCTGCTGTTCTTCGCAGCCATGCTGT TTCTGGTGATCAACCCAGGACAGCTGGTCAATCGCATTGGCAAGTTCATCACGCCTGTGCTGCTGGCTGCACTGCTGGTCCTCGGCGGCGCGGCGATTTT CGCACCGGCAGGCGAGGTCGGCGCGGCTACCGAGAACTATCGTGCTGCGCCACTGATCAAGGGCTTTCTCGAGGGTTATCTGACCATGGATACCCTCGGT GCATTGGTCTTCGGTATCGTGATCGCCACCGCCATCCGTGACCGCGGCGTGACCGAGCCGGCATTGGTGACCCGCTATTCCATGATCGCGGGCGTAATAG CCGCCGTCGGTCTGTCGCTGGTGTATCTGGCGCTGTTCTACCTCGGCGCCACCAGCCAGGGTATCGCTGCCGGTGCGGAAAACGGTGTGCAGATCCTGAC GACCTACGTGCAGCATACATTCGGTACACCGGGCAGCCTTCTGCTCGCCGTGGTCATCACCCTGGCCTGCCTGACCACTGCCGTAGGCCTGACGACTGCC TGTGGCGAGTTCTTCAGCGCGTTGCTACCGGTTTCCTACCGTACCGTCGTGATCGTCTTCGCGCTGTCCAGTCTGCTGGTGGCCAATCAGGGGCTGACCC AGCTGATCAGTGTGTCGGTGCCGGTGCTGGTGGGGCTGTACCCGCTGGCCATCGTGCTGGTTGCGCTGAGTCTGCTGGATCGTTTCTGGCTGTCGCCGTC ACGGGTGCTCGTTCCGGTGATGGGCGTCACGCTGATTTTCGGCATCGTCGATGGTCTCGCCGCAGCGGGCCTGGGTAACTGGGTTCCGGCGCTGTTCAGC CAATTGCCATTGGCGGATCAGAGCATGGGCTGGCTGGTCCCGGTGCTGGTGATGCTGATTCTGGCTGTGGTCACGGATCGCCTGCTTGGGCGTGCTGAAC GAGTGCAGAACCGGACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATGATTGTCGCGCGGCATCGCTGCTGGCATTCGTTCGGCCAGCGATGCGGCGCTGTCGTCGAACGTGGTGCTGGTTATAATCTCGCGACGTTTCCGAGG GCGCGTCATGACGTTATCCGATCCAAACCTGCCGCATCTGTTCGCCGTACTGTGGTTCATCGTCTGCTGGGCGGGCTATACCCGTTACGCCAGCTGGCGA GGGCGCGATACGGCCTGTCTGGCAAGTGTGCTGCATCTGTATCGGCAGGACTGGATGCAGCGGCTACTGATGCGCGACAACCGCATCGCCGACGCCAACG TGATCGGCAATCTGGAGCGCAACGCATCGTTTTTCGCGTCCAGTACGTTGATCATCCTCGCCGGTATCCTGACCGTATTGGGGGCATCGGATCGCGCGGT TTCGCTGCTGGCCGATCTGCCCTTCGTGCAGCCGGTCAGCCGCGGACTTTCGGAGCTCAAGCTGCTATGCCTGGCGGTGGTTTTCGTCTACGCGTTCTTT
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Amino Acid Sequence |
>branched chain amino acid transporter
MNRLKGFDLLALGFMTFALFLGAGNIIFPPSAGMAAGEFVWQAALGFLLTGVGLPLLTVVALARVGGGMDRLTAPLGKVAGTVLAVAVYLAIGPLFATPR TAVVSFEMGIAPFSGNSGTPLFIYTLLFFAAMLFLVINPGQLVNRIGKFITPVLLAALLVLGGAAIFAPAGEVGAATENYRAAPLIKGFLEGYLTMDTLG ALVFGIVIATAIRDRGVTEPALVTRYSMIAGVIAAVGLSLVYLALFYLGATSQGIAAGAENGVQILTTYVQHTFGTPGSLLLAVVITLACLTTAVGLTTA CGEFFSALLPVSYRTVVIVFALSSLLVANQGLTQLISVSVPVLVGLYPLAIVLVALSLLDRFWLSPSRVLVPVMGVTLIFGIVDGLAAAGLGNWVPALFS QLPLADQSMGWLVPVLVMLILAVVTDRLLGRAERVQNRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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