Pseudomonas stutzeri KOS6, B597_000655
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 116 | 269 | 1.42988E-42 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 109 | 262 | 1.1E-21 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 119 | 273 | 1.41E-36 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 92 | 533 | 0.0 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 286 | 532 | 9.29E-86 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 288 | 522 | 6.6E-73 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 281 | 527 | 1.6E-106 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 108 | 282 | 1.7E-43 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 283 | 541 | 2.3E-96 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 114 | 262 | 5.5E-30 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 287 | 527 | 1.53052E-109 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 102 | 271 | 1.6E-39 |
| FunFam | G3DSA:3.20.20.450:FF:000001 | Cyclic di-GMP phosphodiesterase yahA | - | - | 283 | 537 | 5.0E-90 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.