Pseudomonas stutzeri KOS6, B597_018640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCCTGCGGGTTGACGTGCAGCAACTGCTCGATGCGCTGGCGCATCTCGGCGGCGGCCTTGTTGGTGAAGGTCACCGAGAGGATCGAATGCAGCGAGGC GCGCTCGACCTGGTGCAGCCAGGCGATGCGGTGCACCAGCACACGAGTCTTGCCCGAGCCGGCGCCGGCCAATACCAGTTGACGACCCAGCGGTGCGGCC ACGGCCTGGCGCTGGGCGTCGTTGAGGGAGTTCAGGAGGAGAGAGAGATCGTCATGCATCGCGGCATTCTATTGGAAATGCCTGCGCTGCGCTCGCCCTG TAGTCCGTTCGGATAAGTCGCATTGGCCGGCAGGACCGCATTCAGGTCGGCCTCCGCTTAGCCATTGGTCGATGATTGTGGCTGTTGTCGATTTTCCGAC GCGCCGTAATATGACGCGGCGCTAGCAACGTGCCATTATCGGGCGTGTTTTGGTTCCTGAGGAGCCTGATTCGGGTGCATCTACTATTAGAACAACAGTC
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| DNA Sequence for Gene |
>B597_018640
ATGACCGATTCCATTCGAACCGCCTGCCCGGCCTCTGCGACGTCAGTTCCAGGCAGTCCGGCAGCCTTCGACCACGCTGCCGAACGTACGCGCCTGCTTT ATCAGGGCTCGCGTATTCCAGCCCTGCTGCTGTTGCTTCTCACGCTGGTCTGCGGCGTGCTCCTCTGGGGGGAAAGCGCCGCTGTCGAACTCGCGGCCTG GCTGGGCTGGATGCTCACCCTGGGCCTGCTATGGCTGCAGCAGGTCATGGCGTTCAACAAGGCCGACACCGAGGCACAGGCCGCGCCACACTGGAGATGG CGGTTCTTGCTGGGTAGCAGCGTCTCGGCGCTCAGCCTGAGTTATGCGATGGTGGTTCTGGTGCCGGCCGATAACTTCGCCATCCAGGCGCCGCTGTACG GACTGATCGGTTCGGTAGTGGTAGCCGCCAGCGTCGCGTATGGCGTCAGCCTGCCGGCCTTCTTCAGTTTTGCGGTGCCCAGCCTGTTGCCGGCCGGGCT GTTGCTGATGAGCAGCGAACATCCGCTGCAGCAGGGCTGGGGCCTGCTGGCGATGATCGTGTTGGCGACCCTCAGTCTGATTGCCTGGCAGATCAGCCGG CTGGTTCGCGATGGGCTGGACCAGCGTCTGCACAAGTTGCGCCTGATCGAGCGGCTTGAGGCGGCCGGCCGCGACGCGGATCTGCTCAACTGTCGGCTGG CGTCGGAAGTGGAGCACCGGCGCCACGCCGAGCAGCAACTGCGCAGCGCCTACGATGGTCTCGAGCAGCGAGTGGCCGAGCGAACGGCGGAGCTGGCCCG GGTCGCCGAGGAGCTCGGGAAAAGTGAGGAGCGGCTCAATCTGGCACTGGATGCCAGCGGCCTCGGTCTGTGGGACTGGGACCTGCAGAACAATCGTGTG CACCACTCACGCCTGGAAGTGGTCTTCGGCATCGGCCAGCAGAATCATCAGGATGACAATGGCTCGCCGCTGCCGGATATCCATCGCGACGATCTGGATC GTGTTCGCGCCGCCTTGATCGCGCACCTGAAAGGCGAAACCGAGCTGTATGTCATCGAATACCGTGCGGTGCGAGCCGACGGCACTGAGCTGTGCTTCGA GGACCGCGGTCGGGTTATCCAGCGCGCCACCGACGGCCGGGCCCTGCGCATGATCGGCACCCGCCGCGATATCAGCGAGCTGCGCCGCCAGGCCGAGCAG CAACGGCTGGCGGCGGCGGTGTTCGAGGCAGCCAGCGAAGGCATGGTGATCATGAACGACCGGTACCGCGTGCTGGCGGTCAATGACGCCTGTTGCGCGC TGTCCGGCTACAGCCGTGAGGAACTGCTCGGCCGCAGTGTGGCGCGCATCTCCAGCTCGCCGGAAAGCCAGCGTCAGTACGAAGCCATGCGCGAAGCGCT GGAGCGCCACGGTTACTGGCAGGGTGAGCTGATCGAGACGCGCAAGAGCGGCGAGGTCTACCCGCAGTGGGTGCAGCTGCGCGTGGTGCGCGATGCCAAC AACAGCGTCACCCACGTGGTCGCCTTCCTTTCGGATCTCAGCGTGCGCCGCCAGATCGAGGAGCGCCTGCGCTACCTGACCCATTACGATGACCTCACCG GGCTGGCCAACCGCGGCCTGCTCAAGGAGCGCCTGCACCAGGCCTGCCAGCGGGTGCGTCGCAACGGCCGCAACATGGCGGTGCTGTACATCGATCTGGA TCGCTTCAAGCTACTCAACGAAAGCCTGGGCCATGAGGCGGCCGATGCGCTGCTGCGCGAGGTGTCGCGCCGGCTGACGCAGACCCTGGCCGACGCCGAC ACCATCGCGCGCCTGTCCGGTGACGAGTTCGTCGTGCTGCTCGACGCCTACGGCGGCCTCGGCAGCCTGACGCAGCTGGGCAGCCGGCTGCTGCGCCGCA TCCGCAAGCCGATGCTCATCTGCGACCAGGAACTGGTGATCAGCGCCTCCATCGGCGTCAGCCTACTGCCGGACAACAGCCGCGATCCGGAGCTGCTGCT GCGTCAGGCCAACATGGCCATGCAACAGTCCAAGCATCTGGGCGGCAACACCCTGCAGTTCTTCACCGAACGCCCGCAGGCGTCGAGCATGCAGTACCTG CAGCTGGAGAATCAGCTGCGCAAGGCGCTGGAAGCTGGCCAGCTGGAGGTCTTCTATCAGCCACGTCTAAGCCTGGCCGACGATGCGCTGGAAGCCGCCG AGGCCCTGGTGCGCTGGCGCCACCCGCAGCGCGGCCTGATCGCCCCGGCCCATTTCATTCCGCTGGCCGAGGAAACCGGACTGATCATTCCGCTTGGCGA GTTCGTGTTGCGCGAGGCCTGCCGCCAGGCACGCCAATGGCAGCAGGAGGGACTGGCCGAGATTCGCGTGTCGGTGAACCTATCGGCCAAGCAGTTGCGC CAGGGCAACTTCGTTAGCCTGGTGCGCCAGGTACTGGACGAAACCGGCCTGCCGGCGGTGATGCTGGAACTGGAGCTGACCGAGAGCCAGCTGCTCGACG ATATCGACAATGCCATCAACATCAGCGAGCAGCTGCGTGCGCTGGGCGTGAAGCTGGCAATCGACGACTTCGGCACCGGCTTCTCCTCGCTGAGTTACCT CAAGCGATTCCCGGTGGACTACGTGAAGATCGACCGTTCGTTCATTTGTGAGCTGGAGCACTCCAGCCAGGATGCCGCGATCACCCGGGCGATCATCGCC ATGGTGCACAGCCTGGAGCGCCGCGTGGTGGCCGAGGGTGTGGAAACCCAGGCGCAGATGGATTTCCTCAAGGCGCACCAGTGCGATGAAATCCAGGGCT ATCTGCTCAGCCCACCGGTGCCGGCCGAGCAGTTCGCCGAGCTGCTGCGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAGCGCGCCGGGTCGGTTTCAGCCGCGGGTGGTACTACCCTCCAGCTCGCGCATCAGCAGCGCGTAGCGCAGGTCCACATCCTCCGGCACCGGCAGGT AGACCGTATGGCCGTCGCCGGGCGCCACCTCGATGGCTTCGCCGCGGCTGTTCAGCAGCTGCTCCAGGCGCAGGTTGAGATTGCCCTGGGGCGTCATCAG CTCCAGCCTGTCGCCCACCGCGAAGCGGTTCTTCACCTTCACCTCGGCCAGGCCGTCGCGGCGTTCGCCGGTCAGTTCGCCGACGAACTGCTGGCGCTCG GAAAGCGAGAAACCGCGCTCGTAGTTCTGGTATTCATCGTGCACGTGACGGCGCAGGAAACCTTCGGTGTAGCCGCGGTGGGCCAGCGATTCCAGGGTAT CCATCAGCGACCTGTCGAACGGCCGTCCGGCGAGGGCGTCGTCGATGGCCTTGCGGTAGACCTGTGCGGTGCGCGCCACGTAATAGTGGCTCTTGGTACG
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| Amino Acid Sequence |
>diguanylate cyclase
MTDSIRTACPASATSVPGSPAAFDHAAERTRLLYQGSRIPALLLLLLTLVCGVLLWGESAAVELAAWLGWMLTLGLLWLQQVMAFNKADTEAQAAPHWRW RFLLGSSVSALSLSYAMVVLVPADNFAIQAPLYGLIGSVVVAASVAYGVSLPAFFSFAVPSLLPAGLLLMSSEHPLQQGWGLLAMIVLATLSLIAWQISR LVRDGLDQRLHKLRLIERLEAAGRDADLLNCRLASEVEHRRHAEQQLRSAYDGLEQRVAERTAELARVAEELGKSEERLNLALDASGLGLWDWDLQNNRV HHSRLEVVFGIGQQNHQDDNGSPLPDIHRDDLDRVRAALIAHLKGETELYVIEYRAVRADGTELCFEDRGRVIQRATDGRALRMIGTRRDISELRRQAEQ QRLAAAVFEAASEGMVIMNDRYRVLAVNDACCALSGYSREELLGRSVARISSSPESQRQYEAMREALERHGYWQGELIETRKSGEVYPQWVQLRVVRDAN NSVTHVVAFLSDLSVRRQIEERLRYLTHYDDLTGLANRGLLKERLHQACQRVRRNGRNMAVLYIDLDRFKLLNESLGHEAADALLREVSRRLTQTLADAD TIARLSGDEFVVLLDAYGGLGSLTQLGSRLLRRIRKPMLICDQELVISASIGVSLLPDNSRDPELLLRQANMAMQQSKHLGGNTLQFFTERPQASSMQYL QLENQLRKALEAGQLEVFYQPRLSLADDALEAAEALVRWRHPQRGLIAPAHFIPLAEETGLIIPLGEFVLREACRQARQWQQEGLAEIRVSVNLSAKQLR QGNFVSLVRQVLDETGLPAVMLELELTESQLLDDIDNAINISEQLRALGVKLAIDDFGTGFSSLSYLKRFPVDYVKIDRSFICELEHSSQDAAITRAIIA MVHSLERRVVAEGVETQAQMDFLKAHQCDEIQGYLLSPPVPAEQFAELLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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