Pseudomonas stutzeri KOS6, B597_005280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCTCACAGCAGAATCGCACGGGTCAGCGCTCATCAATCGCGAACCTTCGCCCTCATAAGCCGCATTCCAAGGCCTATGCGTTCGCCAAATACGAAGC CAGGCTTGTTCAAATATGAATTTCCCGCGGTCAGGAGCGCCGAGTAGAGTCAGCCGAAGCATGAATCACGCGAGCGATGAACAAACCGATCGATCGCACA GCAATTCACCATTTTCTGTCTATGCCGGCGGCACGCTGAAAAGATCGCAAACCTGCGAGCCAGAAGGGTCGGCTGAGAATCATTCGTCAGTATTTTGCCA TCATGCGAGTAAACTTCCGTGTTACGCGTCGCGTCGCCTTGGGCAATTGGCACAAGGCTTGCTCTCGCTAACACGATGAACCGGCAAGGCGAGCCGTTGA GGGCGCGTACTCCCAATGACGCCTAGACTTGTCTTGCTGGTTACAGCCGAGCTTTTCGCTTCCATGCGGCAGCTCAATTCACAACAAGAGGAAAACAACA
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| DNA Sequence for Gene |
>B597_005280
ATGTTCAAACTGACTGCCAAGGCGCTGGCATGCGCCCTGTCGCTGAGCATCGCCGGTCTGGCCCAGGCGGCTGACCCGATCACCATCAAGTTCTCTCACG TGGTCGCCGAGAACACGCCGAAAGGCCAGGGCGCGCTGATGTTCAAGAAGCTGGTGGAAGAGCGTCTGGCCGGCAAGGTCGAGGTACAGGTCTACCCGAA CTCCTCGCTGTTCGGTGACGGCAAGGAAATGGAAGCCCTGCTGCTCGGCGACGTTCAGCTGATCGCTCCGTCGCTGGCCAAGTTCGAACACTACTCCAAG GGCGTTCAGGTCTTCGACCTGCCGTTCCTGTTCGATGACATCGCCGCGGTCGACCGCTTCCAGAAAGGCGAAGCCGGCCAGAGCCTGCTGCGCTCCATGG AAGACATGAACATCACCGGCCTGGGCTACTGGCACAACGGCATGAAGCAGCTGTCGGCCAACAAGCCGCTGCGCGAGCCTAAGGATGCCCGTGGCCTGAA GTTCCGCGTACAGGCTTCCGCCGTGCTGGACGAGCAGTTCAAGGCCGTACGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTTTACCAGGGTCTGCAG ACCGGCGTGGTCAACGGTGCCGAGAACCCCTACTCGAACATCTACTCGCAGAAGATGCATGAAGTACAGAAGTACATCACCGAGTCCAACCACGGTCTGC TGGACTACATGGTGATCACCAACACCAAGTTCTGGAACGGTCTGCCGACTGACGTACGCGGCGAGCTGGAAAACATCCTGAACGAAGTGACCGTCGCGGT GAACAAGCAGGCTGACGAGCTGAACCAGGGCGACAAGCAGCGCATCCTCGACGCCGGCACCACCGAAATCATCGATCTGACTCCGGAGCAGCGCGAAATG TGGCGCGAAGCCATGAAGCCGGTCTGGAAGAAGTTCGAAAGCGACATCGGTGCTGACCTGATCAAGGCCGCCGAAGCTGCCAACCAGGCTCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCTTGCCGAGGGGCGGTCACACTCCGCCCCTTTGCTGTTCCACCCAGCGATATCCGACAGCTCAGTGAAAAAACAAAGCAGCTAGCGAAGACGAAGCC CGCACCAAGGGCAGACAGGCAAGGCCGAGGCGATCCCGGGCCGACCCGCTTCGATGGCGACAACAAGAGTTTTTCATTGCTCTGTCCCCCAGCCTGCCCC GGCTGGTTCACGGCGCACCTCCGTGCTGCCTTTCGTCACAACTGCAGTCCATTCGGGAGATGTCATCCATGAACGCCCTCTGGCGCGTCTGGGACCACTT CGAGGAAGGCTTCATCGCCTTTCTGCTGGCCGCCATGACCCTGGTGACCTTCGTCTACGTGATCCTCAACAACCTCTACACGCTGTTCTACGACCTGGGC GACCGGTTCGAGGGAAGCGCCGACTTCTGGTTCGCCATCGGTGATTTCATCATCGGCCTGGCCCAGTCCATGACCTGGAGCACCGCGCTGACCAAGGCGC
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| Amino Acid Sequence |
>C4 dicarboxylate binding protein
MFKLTAKALACALSLSIAGLAQAADPITIKFSHVVAENTPKGQGALMFKKLVEERLAGKVEVQVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEHYSK GVQVFDLPFLFDDIAAVDRFQKGEAGQSLLRSMEDMNITGLGYWHNGMKQLSANKPLREPKDARGLKFRVQASAVLDEQFKAVRANPRKMSFAEVYQGLQ TGVVNGAENPYSNIYSQKMHEVQKYITESNHGLLDYMVITNTKFWNGLPTDVRGELENILNEVTVAVNKQADELNQGDKQRILDAGTTEIIDLTPEQREM WREAMKPVWKKFESDIGADLIKAAEAANQAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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