Pseudomonas stutzeri KOS6, B597_RS0223205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTCACTTATAAAAAAGGTGAATTTTCCTCTGCTGACTCTGCCGGTTATCAGTGCCGGCATCAGTCTGGTGAACAACACTTTTCTATTTTTAGCCACGT CATTGATTCTGGCTCTTCTTGGCTTCTTTCCCGGAGAAGTCATTCTGATTTTGCCGCTGTTGATGGTGCTTACCCTCTTGTTTGGCCTTTCGGTGGGGTT GGTGTTAGGCATCATTAACGTTTTCGTGCGCGATATTGGTGTGGTCGTACCCATCGTCTTGCAGTTCCTGTTCTGGTTGTGCCCTATCGTCTACAGTCCT GAAAGTTTGCCGGCCGGGTTTCGCGAGCTGGTTTTGCATAATCCGGTATCCGGGCTCGTACAGGCTTATCAGAACGTGCTGGTGTTTCAGCGTTTGCCTG AGTGGAACTGGTTGTTGCCTGCGTTGATAATGGCCATTGTTTGTCTGCTGCTGTTCCGCGTCCTGCTGCGTCGTACCTTTGCGCAGATGGTGGACATCTT
|
|
| DNA Sequence for Gene |
>B597_RS0223205
ATGAGTGTCCCAGGCAGTTTTCACGTCGCGCATTTAAGCAAGCGCTTCGCCAAGTTTCGCAGCGATGGGCATCGGTTGCTTCATTGTTTGATCCCTTCCA TCCAGCCGCTTAGTGAAACCGTAGTGTTGGATGATCTCAACTTTACTGTCGCGCCGGGCGAGGCGCTTGGAATCGTCGGGCACAACGGTGCCGGCAAAAG TACCTTGCTTAAGATCATCACCGGGACATTGGCGCCGAGCAGCGGTAGCGTTGTATTGAATGGTCGGGTTTTCGCGATTCTTGAACTGGGCATGGGCTTC AATAGCGACATGACGGCACGCGAGAATGTACGGCATGTTGCCGGTCTAATGGGCATATCTGCAGTCGAGATCGAAGCGGTCCTGCCGGAGCTGGAAGCTT TCGCCGAGATTGGCGCCTATTTTGATCAGCCCATGCGCCACTACTCCAGCGGCATGCACATGCGTGTGGCCTTTGCTCTGGCAACGGCGATTCGCCCGGA TATCCTGATCGTCGATGAAGCGCTCAGCGTCGGCGATGCTTATTTTCAGCACAAAAGCTTTGAACGTATTCGCCAGTTTCGTGAGCAGGGCACGACACTG TTGTTCGTTTCGCACGACAAGTCAGCAGTCCTTGCGCTCTGTGACCGCTGCATACTGCTCGACCAGGGTCGCCTGCTGATGGATGGCCCACCGAGTGCGG TAATGGATTATTACAACGCCCTGATTGCCGAGAAAGAATCGGAAACGCTGGTTCAGCATTACAACGATAAGGGGCAGGCTGTTACCCGCTCAGGTACCGG CGAGGCCACACTCGAATTGCTCGAGTTGCTGGTAAGCGGAGTAAGCGTCGAAACGATCGAGGTAGGCGAATCGGTCATCCTCCGTGGAATTGTGCAGTGT CATGCACCAATTCCTAAGTTGGTCATGGGTTACATGATCAAGGATCGGCTGGGGCAGGCCGTGTTTGGCATCAACACTCACCTTACCGGTCAGGTCCAGG AGCATCTACTGGAAGGGGAGCGCTTGCGTTACGACTTTGCTTTTCCTGCCAATCTCGGGCCAGGCAGTTATTCGATTTCGATATCGCTTTCCAGCACCCA GACGCATTTGCAGAACAACTATGAGTGGCGCGATCTCGCGCTGGTGTTCACTGTGGTCAATACCCGACATCATCAGTTCGCCGGGTGTGCCTGGATCGAG CCGGGTATCACTATCAGAAAGCTTTCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCTCATTTGGCCAATTCAATCCTTTATGCCAAACATCGGATCAAGCTCGCGCTGATCGCATTGATCCGCTTTGTCGTATCCCGTCCGAAGCTGTTCGTG CTGGGCATGCGCATTGTTAATCGCATACCTCCGCTCAAATGGTTCCTGTGGCGGATCCATGCCTCGACTCGCAACGAAATTAGCCGCTCGGTGCCCGTTA CATCGCCCAGTCGTACGCCGCCGGCGGCGAAGGCGGTTTATCTACAGCTGAGCAGTACAGGTACAGGGGAAAGGGAAGTCTGACATGCGTATCGTATTCG ATCTTCAATCCTGCCAGACGCCCAGCTCACGCACGCGCGGTATCGGTCGTTACAGCCTGTCACATGTTCAGGCGTTTGCACGGCAAGCGTCGGCGCATGA AGTGGTCCTGCTCCTCAACAACAGCTTTAGCGACACGATCACTCATGTCCGGGAGGCTTTCTCAGGGCTGATCGACCCAGCCAACATACATGTATTCAAC
|
|
| Amino Acid Sequence |
>sugar ABC transporter ATP-binding protein
MSVPGSFHVAHLSKRFAKFRSDGHRLLHCLIPSIQPLSETVVLDDLNFTVAPGEALGIVGHNGAGKSTLLKIITGTLAPSSGSVVLNGRVFAILELGMGF NSDMTARENVRHVAGLMGISAVEIEAVLPELEAFAEIGAYFDQPMRHYSSGMHMRVAFALATAIRPDILIVDEALSVGDAYFQHKSFERIRQFREQGTTL LFVSHDKSAVLALCDRCILLDQGRLLMDGPPSAVMDYYNALIAEKESETLVQHYNDKGQAVTRSGTGEATLELLELLVSGVSVETIEVGESVILRGIVQC HAPIPKLVMGYMIKDRLGQAVFGINTHLTGQVQEHLLEGERLRYDFAFPANLGPGSYSISISLSSTQTHLQNNYEWRDLALVFTVVNTRHHQFAGCAWIE PGITIRKLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|