Pseudomonas stutzeri KOS6, B597_018010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGGGAGGAGCAGGTCGATCCGCTGTCGCTGAAGGGTTCCTATGCTGGCGCCATGGGCTTGCCGCAGTTCATGCCGAGCAGTTTCCGCGCATATGCCG TGGACTTCGACGGTGATGGCCATATCAATATCTGGAACAATCCGGCCGACGCCATCGGCAGTGCCGCCAGTTACTTCAAACAGCATGGCTGGACCGCCAA CGGGTCCGTCGTGGCCCGCGCCGAGGTATCGGGCGAACGCCACGAAGAAGGACTCACCGTCGGGCTCGAGTCGCAGAAGAACGCGGGCGAGATGCGCAGT CTGGGTTGGTCGTTCAACCCGGCCGTGGCTGACGAGACGGCCGTGACCGCCTTCCGGCTGGACGGCGCCGAGGGCGACGAATACTGGGTGGGTCTGCCGA ACTTCTATGTCATCACCCGCTATAACCGCAGCGTGATGTACGCCATGGCCGTGCATCAGCTGTCCCAGTTGCTGGCCGAAGCGCGGGGCGAACGCGAACA
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| DNA Sequence for Gene |
>B597_018010
ATGAACCTTCTCTGGAGCAGGCTGCTCGGCCTGACCGTGACTGCTGTGCTGCTGGCAAGCTGTTCATCCACGCCTGCGCCCAGCGGCATGCCCGGCAAGA GCAGCGGCATCAGCGGGCCGGGCGACTACAGCCGTCCGCACAAGGACGGCGCGCCCTGGTGGGACGTCGACGTTTCGCAGATTCCCGATGCCGTTCCGAT GCCCCATTACGGGCCTGTCAAGGCCAATCCCTATACAGTGCTGGGCAAGACCTACTTCCCTATCAGCGACGGTCGCCGCTACTCGGCGACGGGTACCGCG TCCTGGTACGGCACCAAGTTCCATGGGCAGCCCACGGCCAATGGCGAGAAGTACGATCTGTACGGCATGAGTGCGGCGCACAAGACCTTGCCGCTGCCCA CGTATGTCAAGGTGACCAACCTGGACAACGGGCGCAGCGTGACATTGCGGGTCAACGACCGTGGTCCGTTCTACTCGGACAGGATCATCGACCTGTCCTT TGCGGCCGCGAAAAAGCTCGGCTACGCCGATAGCGGCACCGCCAGGGTGAAGGTCGAGGGGATCGATCCGCAGCAGTGGTGGGCCGATCAGGGTCGGCCG GTGCCGACGATGATGGCGCAGCCGCAGATGGCCGCTGCCAAGCCGCCGTCCGGCACCATCGCCCAACCGATCGAGCAGTACACGCCACCGCCTCGGCAGC ACGCTGCGGTCACGGTGCCGCTGGAGGTCGATGCAGGAAAGGACGCTTCGTCCGCAGCGGGTGGCCTGTTTCTCCAGGTGGGCGCCTTCGCCAATCCGGA TGCAGCGCAGCTGCTCAAGGACAAGCTGAGTGGTGTAGTGTCCGCACCGGTATTCATCAGCTCGGTGGTACACAACCAGCAGACCCTGCATCGGGTGCGC TTGGGACCTATCGACACGCCAGATGAGGCCACGCAGCTCGAGCAGAGCGTTCGCCTGGCCAATCTCGGACAGCCGCGGCGGGTTTCTGCCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGTTTGCAATTCTTGCTTTGTTTTACCTGACTTAATTGGGATTCGGATGAACATCACCAGCCTCGTGCAACGCTTCATGGTACTGACTCTGCTGGCGGT CGCTCCGACCGTCTGGGCGGCCCAAATGCTGCCGTCGGCTCCGCAGCTGGCTGCCAAGTCCTACATGCTGATGGACGCCGCCAGTGGTGAGGTGCTGGTC GAGCACAATGGCGACGAGCGCCTGCCACCGGCCAGCCTGACCAAACTGATGACCGCCTACATCGCCACGCTGGAGATCAAGAAAGGCCAGATCAGTGACG CTGACATGGTCACGGTAAGCGAGAAGGCCTGGCGTACTGGCGGTTCGCGCATGTTCATTCAGGTCAATACCCAGGTTTCGGTGGACGACCTGCTGCACGG CATCATCATCCAGTCGGGCAACGATGCCAGCGTGGCGATGGCCGAGTACATCGCCGGTAGCGAGGAAGCGTTTGCCGACCTGATGAACAGCACCGCTCAG
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| Amino Acid Sequence |
>rare lipoprotein A
MNLLWSRLLGLTVTAVLLASCSSTPAPSGMPGKSSGISGPGDYSRPHKDGAPWWDVDVSQIPDAVPMPHYGPVKANPYTVLGKTYFPISDGRRYSATGTA SWYGTKFHGQPTANGEKYDLYGMSAAHKTLPLPTYVKVTNLDNGRSVTLRVNDRGPFYSDRIIDLSFAAAKKLGYADSGTARVKVEGIDPQQWWADQGRP VPTMMAQPQMAAAKPPSGTIAQPIEQYTPPPRQHAAVTVPLEVDAGKDASSAAGGLFLQVGAFANPDAAQLLKDKLSGVVSAPVFISSVVHNQQTLHRVR LGPIDTPDEATQLEQSVRLANLGQPRRVSAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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