Pseudomonas stutzeri KOS6, B597_003125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri KOS6 scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGGCCTGGCTGGTCAAGAAGTCCGACGGCAGCCTCGGCCTGGCCAGCACGATCGGCGCTGGCAACCCGATGACCGCCGGCGACAAGCCGCTGCTGACC TGCGACGTCTGGGAACACGCTTACTACATCGACTACCGCAACGCTCGTCCGAAGTTCGTCGAGGCGTTCTGGAACCTGGTCAACTGGGACTTCGTCGCGA AGAACTTCGCAGGCTAAGCTCCACAAGCTAAGCTTCACAGGCAGCATCAGAGAATGCCCGCACCCATGCGGGCATTTTCATTTGGGGCTTCCGCATCGGC TGCCGTTATGTTTTACAGGCCGAGGGATTCATCAAACCGACGAATGACGTCGGTACATTCCTGTACGCTCGGAGATAATCCTCGATTGCCATAGCGCCTT CGCGCTTTGCTGGTTCCCGGCATTAACCGTCTCTTTGACGATTGCCGAATGACTGTCAATACTTGCGCAGCAGAGCACTGGCACGGAAAAGGACCTTCAC
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| DNA Sequence for Gene |
>B597_003125
TTGAAGCTGGAATTGCGCAATAGCCTGTCGTGGAAGCTCCTACGTATCGTCCTCTTGTCGGCCCTGGCGGTAGGGCTTCTGCTCAGTTGTGCGCAGATCA TCTTCAGCGCCTACAAGACACGCCACCTGATCGAAGCCGATGCCCAGCGCATTCTGCGCATGACTCGCGATCCTTCCACCCAGGCGATCTACAGCCTCGA CCGTGAAATGGGCGCCCAAGTCATGGAGGGCCTGTTTCAGCACGAGTCGATTCGCATGGCGTCCATCGGTCATCCGGACGAAGGCATGCTGGCATTGAAG ATCCGCCCGCCTATCACGCTCTCGACGCGCTGGCTGACCGACCCGATCCTCGACCGCGACCAGCAGTTCTCCATACCCCTGATCGGCAAGCCGCCCTACA ACGAGTACTACGGCGACCTGCGCATCACCCTGGACACGGCCCAGTACGGCCAGGAGTTCGTCAACGACTCCATCGTCATCTTCGTCGTCGGCATGTTGCG CGCACTGACGCTGGGCCTGATCCTCTACCTGATCTACCAGTGGCTGCTGACCCGTCCGCTGACCAAACTCATCGAGCATCTGGCGCAGATCAACCCCGAC CGCCCCGGTGCGCACAAACTGCCGATGGTCAAAGGACATGAACGCAATGAGCTGGGCTTGTGGGTCAATACCGCCAACGGCCTGCTCGCCTCCATCGAAC ACAACATGCACCTGCGCCAGGAAGCCGAAAGCAGCCTGCAGCGCATGACGCAGTACGACTCGCTGACCGGCCTGCCCAACCGCCAGCAGTTGCAACGGCA GCTCGACCATATCCTCGACGAGGCGCGACGCCTGCAACGACACATCGCAGTGCTCTGCCTGGGTCTCGACGACTTCAAGGGAATCAACGAGCAATACAGC TACCAGACGGGTGACCGCCTGCTCAAAGCGATGGCCGATCGCCTGCGTGGCTCGGCCAATCGCCTGGGTGCACTGGCGCGACTGGGTGGTGACCAGTTCG TCCTGGTACTGGGCGGCATCGAGCAGCCGTATCAGGCCGCCGAGCTGGCGCAGGAGCTGCTCGACGACCTGGAGAACCCGATCGAACTCGACGGGCACCT GATCCGCCTGCGCGCCACGATCGGCATCACCCTTTATCCCGAGGACGGCGACAGCACGGAAAAGCTCCTGCAGAAGGCCGAGCAGACCATGACGCTGGCC AAGAGCCGATCACGCAACCGTTACCAGTTCTACGTCGCCAGCATCGACAGCGAGATGCGTGCTCGCCGGGAGCTGGAAAATGACCTCAGCGAAGCGCTCA AGCGCGACGAATTCTTTCTGGTCTACCAGCCTCAGGTGGACTATCGGCAGAACCGCATCACCGGCGTCGAGGCCCTGATTCGCTGGAAGCACCCGCAAGG CAGACTGGTGCCGCCCGACCTGTTCATCCCGCTCGCGGAGCAGAACGGCAGCATCATCGAGATCGGCCAGTGGGTGCTCGATCAGGCATGCACTCAATTG CGCCGCTGGCATGCGCAGGGTTACACCGGCCTGCGCGTGGCGGTGAACCTGTCGACCGTGCAACTGCGACACCCACAGCTGCCCGAGATGATCGCCGCGC TGTTGCAGACCCATCAGTTGCCGGCCGAAACCCTTGAGCTGGAAGTAACCGAAACAGGCCTGATGGAAGACATCGAAGCCGCTGCGCAGAACCTGCACAG CCTGCGACGCTCCGGCGCGCTTATCGCGATCGACGACTTCGGTACCGGATATTCGTCGCTCAGCTATCTGAAAAGCCTGCCACTGGACAAGATCAAGATC GACAAGAGCTTCGTCCAGGACATCGGCCAGGATGAAGGCGCGACCATCGTGCGGGCGATCATCCAGCTCGGTAAAAGCCTCGGCATGACCGTCATTGCCG AGGGGGTCGAAACGCCGGAACAGGAAGCCTATCTGATTGCCGAAGGCTGCCAGGAAGGCCAGGGCTACTACTACAGCAAGCCACTGCCTGCTCGTGAGCT CGATCTGCTGCTGCGCCAGTCGCAGCCATTTGACCGGGCCATCAACTCGGAGCTGTATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCCGTCTCGCCCTGGCCCGACGCTCCTGGTTGTCCATGACAAGCCGGCCCGGGCAACTGGCCAGATGCGCCGACCTGAGCGACACTGCGCCCCTTTTC CGGCCCCGCCCACCGACGAGCTCACGATGAAACGCTTCGTACTCTGCGATACCGCTCCAATCCCCGGCGACGGCGGTGCCTTGTGCCTGTTCGAATATGG CGATGACTTCGTCATCAAGATTCAAGGTGGCAACGGCAACCAGCTGATGAACACCCGCACTCATGGCTCGGAAGATGCCCTGGCCGAGATTCCCTGCAAG CGAATTGCCGCACGGCCGCAGGCACGCGTACTGATTGGCGGCTTGGGCATGGGCTTCACGCTTGCCTCGGCGCTGCGCCATCTCGAGCAGGACGCCGAGG TGCTGGTCGCCGAACTGGTCCCCGGGGTGATCGACTGGAACCGTGGCGCACTGGGTGCGAAATCCGGATATCCGTTGCGCGATGCGCGGGCACTGGTCCT
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| Amino Acid Sequence |
>diguanylate cyclase
MKLELRNSLSWKLLRIVLLSALAVGLLLSCAQIIFSAYKTRHLIEADAQRILRMTRDPSTQAIYSLDREMGAQVMEGLFQHESIRMASIGHPDEGMLALK IRPPITLSTRWLTDPILDRDQQFSIPLIGKPPYNEYYGDLRITLDTAQYGQEFVNDSIVIFVVGMLRALTLGLILYLIYQWLLTRPLTKLIEHLAQINPD RPGAHKLPMVKGHERNELGLWVNTANGLLASIEHNMHLRQEAESSLQRMTQYDSLTGLPNRQQLQRQLDHILDEARRLQRHIAVLCLGLDDFKGINEQYS YQTGDRLLKAMADRLRGSANRLGALARLGGDQFVLVLGGIEQPYQAAELAQELLDDLENPIELDGHLIRLRATIGITLYPEDGDSTEKLLQKAEQTMTLA KSRSRNRYQFYVASIDSEMRARRELENDLSEALKRDEFFLVYQPQVDYRQNRITGVEALIRWKHPQGRLVPPDLFIPLAEQNGSIIEIGQWVLDQACTQL RRWHAQGYTGLRVAVNLSTVQLRHPQLPEMIAALLQTHQLPAETLELEVTETGLMEDIEAAAQNLHSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDIGQDEGATIVRAIIQLGKSLGMTVIAEGVETPEQEAYLIAEGCQEGQGYYYSKPLPARELDLLLRQSQPFDRAINSELY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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