Strain | Pseudomonas stutzeri KOS6 scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCTGCCGGGCTGCCAACGAGAATCGCTGCGCTGTGGTCAGCACCCGCCTGACACGTCATGGCGAGTGCAGCGCACTGGTCCTCGAAGTGGCCGGCAGCT GGGATGCCCTGGCCCGCATGGAGACCGCACTGCCGGGACTCTCGAAAAAGCATGCATTCACGGCCAACGTGGTACGCAGCGAGGCCCTGGAAAGCCGCCC GCAGGCGCTGCCCTATGTGGCCTACGTGAGCGCTGCCTATCGACCGGACATCCTCAACGAGCTGTGCCAGTTCTTCATCGACCACCGGGTCGAGCTGGAA AGCCTGACCTGCGATACCTACCAGGCTCCCCAGACCGGCGGCACCATGCTCAATGCCACGCTGACGGTGACGCTGCCGGCCGGGACCCAGATCAGCTGGC TGCGCGATCAGTTTCTCGATTTTGCCGACGCGCTGAACCTCGATGCATTGATCGAGCCATGGCGTCCCCAGAACCCGTAAGGCCCAGCACAGGAGTCAAC
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DNA Sequence for Gene |
>B597_008060
ATGGCTGTCGAAATCGATCATCCCGTTCCGTCTTTCCAGGCACAGGCCACCAGCAACCAGGTGATCAGCCCCGAATCGCTGGCCGGCAAGCAGGCCGTAC TGTACTTCTACCCGAAGGACAACACGCCAGGTTGCACGACCCAAGGGCAAGGCTTTCGCGACCAGCACCAGGCGTTCCTCGCGGCGAACACGCTGGTCTT CGGCATCTCGCGCGACAGCCTGAAGACGCACGAGAACTTCCGTGCCAAGCAGGGCTTTCCCTTCGAACTGATCAGCGACAAGGATGAACAGCTCTGCCAG CTGTTCGACGTGATCAAGTTGAAAAAGCTCTACGGAAAGGAATATCTCGGCGTCGACCGCAGCACCTTCCTGATCGACCGCAACGGCGTATTGCGCCAGG AGTGGCGTGGCGTGAAGGTCCCCGGCCACGTGGAAGCGGTACTCAAGGCCGCCCAGGCGCTGAACGAGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGGCCGGCATCAAGCCAGCCGCTGTCCCACCTCACTCGCCGGCTTCGGCAACCGCCGCTGCCGGCCCGCGCGGCCAGGCATAGAGCACGGCCTTGAAC AAGGTCGCCAACGGAATCGCGAAGAACACACCCCAGAAGCCCCAGAGCCCGCCGAACAGCAGCACCGCGCAAATGATCGCGACCGGATGCAAGTTCACCG CCTCGGAAAACAGTAATGGCACCAGCACGTTGCCATCCAATGCCTGAATGATCGCGTAGGCCACCATCAGATAGATGAACTGGTCGCCCAGCCCCCACTG GAACATGCCGATCAAGGCGATCGGGATGGTGACGACGGTCGCGCCGATGTAAGGCACCACGACCGAGATCCCCACCAGCATCGCCATCAGCGCTGCGTAG TTGAGCTCCAGCGCCGCGAAGACCGCATAGGACACCGCGGCGCAAATCAGAATCTCGATCACCTTGCCCCGAATGTAGTTGGCGATCTGCTGGTTCATCT
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Amino Acid Sequence |
>bacterioferritin comigratory protein
MAVEIDHPVPSFQAQATSNQVISPESLAGKQAVLYFYPKDNTPGCTTQGQGFRDQHQAFLAANTLVFGISRDSLKTHENFRAKQGFPFELISDKDEQLCQ LFDVIKLKKLYGKEYLGVDRSTFLIDRNGVLRQEWRGVKVPGHVEAVLKAAQALNEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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