Strain | Pseudomonas sp. GM30 ctg11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACAAGCGCATCGGCGCCAAGCTCATCGGCAAGCAGACTGGCCATCCGCCCGCCCATGGACTTACCACCAATGGCCAAAGTCCCAGTGACATGACGTCGC ACTTCAGCGAACACTTCGCGCCAACACACAAGTAGTTTCGGCGCCGGATTAGGCGGGCGTTTACTGCCATCCACCCGCCGCTGCGCCATATAAGGAAACT CAAACCGCAACACATTCACCCCAAGTGCAGCAAGGCGCCCAGCCATATCGTTCATCCAGTCGCTGTCCATCGGCGCCCCCGCCCCATGGGCCAGGATCAG CGTCGCCGAAGCCTCGCCCGACGCGGCATCCCACAACCACCCACGATCCCGCACGCACTGCGCCCATTGATCCCCGTCAATACTGGCCTTGTGCTGTTTG TCCATGCTTGCCTCGCTTTTAGTCTGCCTATAACTCCAGGCGAAGGATTCGCGGCGTTTTCTGCGCGCGCTCACTTCGGCTGAACCGTGGATGGGGAACC
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DNA Sequence for Gene |
>PMI25_003556
ATGAACACTTCTATCAGTACCGCCTACAACTACAAGGTGGTCCGCCAATTCGCCATTATGACGGTGGTGTGGGGCATCGTCGGCATGGGGCTCGGGGTTT TTCTCGCGGCCCAATTGGTCTGGCCGGAACTCAACTTCAATTTGCCCTGGACCAGTTTCGGCCGTCTGCGCCCGCTGCACACCAACGCGGTGATCTTCGC CTTCGGTGGCTGCGCGCTGTTCGCCAGTTCGTTCTACTCGGTGCAACGCACCTGCCAGACCCAGCTGTTTGCGCCGAAAATCGCCGCGTTCTGCTTCTGG GGCTGGCAACTGGTGATCCTGCTGGCAGCGATCAGCCTGCCGCTGGGTTACACCAGTTCCAAGGAATACGCCGAACTGGAATGGCCGATCGACATCCTGA TCACCATCGTCTGGGTCGCGTACGCCATCGTGTTCTTCGGCACGATCATGCAGCGCAAGACCAAGCACATCTATGTCGGCAACTGGTTCTTCGGCGCGTT CATCATCACCGTGGCGATTCTGCACATCGTCAACAACCTTGAGTTGCCGGTGAGTTTTACCAAGTCCTACTCGGTGTACGCCGGTGCGACCGACGCGATG GTGCAATGGTGGTACGGCCACAACGCCGTAGGCTTTTTCCTCACCGCCGGTTTCCTCGGGATGATGTACTACTTCGTGCCGAAACAGGCCGAACGTCCGG TGTATTCGTATCGCCTGTCGATCGTGCACTTCTGGGCGCTGATCACCCTGTACATCTGGGCGGGCCCGCACCACCTGCACTACACCGCGCTGCCGGACTG GGCGCAGTCGCTGGGCATGGTGATGTCGCTGATTCTGCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCGGGCGCCTGGCATAAG TTGCGCAGCGACCCGATCCTGCGCTTCCTCGTGGTCTCGCTGGCGTTTTACGGCATGTCGACCTTCGAAGGTCCGATGATGGCGATCAAGACGGTGAACG CCCTCTCCCACTACACCGACTGGACCATCGGCCACGTTCACGCCGGCGCGCTCGGCTGGGTGGCGATGATCTCGATCGGCGCGCTGTACCACATGATCCC GAAAGTCTTCGGCAAAGAGCAGATGCACAGCATCGGCCTGATCAACGCGCACTTCTGGCTCGCGACCATCGGCACCGTGCTCTACATCGCCTCGATGTGG GTCAACGGCATCGCCCAGGGCCTGATGTGGCGCGCAGTCAACGAGGACGGCACGCTGACCTACTCCTTCGTCGAAACCCTGGTGGCCAGCCACCCAGGCT TCGTCGTGCGGCTGATTGGCGGGGCGATCTTCCTCAGCGGCATGTTCCTGATGGCTTACAACACCTGGCGCACCGTGCGGGCCTCGCAGCCTGCTGACGT CGTTGCTGCCGCGCAGATGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGTCCGCCATGAAACACGAAACGATTGAAAAGAACGTCGGCCTGCTGATGCTGCTGATGGTGTTTGCCGTGAGCATCGGCGGCCTGACCCAGATCGTC CCGCTGTTCTTCCAGGACGTCACCAACAAACCGGTGGAAGGCATGAAGCCCTACACCGCGCTGCAACTGGAAGGCCGCGACATCTACATCCGCGAAGGCT GCGTCGGTTGCCACTCGCAGATGATCCGTCCGTTCCGCGCCGAAACCGAACGCTACGGGCACTACTCGGTGGCCGGCGAGAGCGTGTGGGATCACCCGTT CCTCTGGGGCTCCAAGCGTACCGGGCCGGATCTGGCGCGAGTCGGCGCGCGTTACTCGGACGACTGGCACCGCGCGCACTTGTACAACCCGCGCAACGTC GTGCCTGAGTCGAAAATGCCGGCCTACCCGTGGCTGGTGACGCAAGCGGTCGACAGCAGCCACACCGAAACCAAGCTCAAGACCATGCGCACCCTCGGCG
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Amino Acid Sequence |
>cytochrome oxidase subunit I
MNTSISTAYNYKVVRQFAIMTVVWGIVGMGLGVFLAAQLVWPELNFNLPWTSFGRLRPLHTNAVIFAFGGCALFASSFYSVQRTCQTQLFAPKIAAFCFW GWQLVILLAAISLPLGYTSSKEYAELEWPIDILITIVWVAYAIVFFGTIMQRKTKHIYVGNWFFGAFIITVAILHIVNNLELPVSFTKSYSVYAGATDAM VQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHK LRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHMIPKVFGKEQMHSIGLINAHFWLATIGTVLYIASMW VNGIAQGLMWRAVNEDGTLTYSFVETLVASHPGFVVRLIGGAIFLSGMFLMAYNTWRTVRASQPADVVAAAQMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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