Pseudomonas sp. GM30, PMI25_003890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATTACTTCATCTACACGGTGTTGTTCCTGGTGGTGCTGGCCGTGCTGTACATCAAGCATCGTCTGGTGAAAATGCCGGTGGGTCGCGCCTGGGAAGCCC TGCGCGAAGATGAAATCGCCTGCCGCTCGATGGGCCTCAACCACGTGCTGGTCAAGCTCTCGGCGTTCACCATCGGTGCGTCGACGGCGGGTCTGGCCGG GGTGTTTTTCGCCACCTATCAAGGCTTCGTCAACCCGACCTCGTTCACCTTCTTCGAATCGGCGCTGATCCTCGCCATCGTCGTGCTCGGCGGCATGGGC TCGACCATCGGCGTGGTGATCGCAGCGTTCGTGCTGACGGTTGCTCCGGAATTGCTGCGCGGCTTCGCCGAATACCGCGTGCTGCTGTTCGGCATTCTGA TGGTGTTGATGATGATCTGGCGACCACGCGGGCTGATTCGCATCAGCCGTACCGGGGTCACTCCACGCAAAGGTGCCATTCACTATGAGAGGACTGCGCC
DNA Sequence for Gene
>PMI25_003890
ATGAGTGAAGTCGTTCTCTCTGTGGAAAAACTGATGATGCACTTCGGTGGCATCAAGGCCCTGAGCGATGTCAGCCTCAAGGTCAAACGCAACTCGATCT TCGCCCTGATCGGCCCCAACGGCGCCGGCAAGACCACGGTGTTCAACTGCCTGACCGGGTTCTACAAGGCCTCCGGCGGCAAGATCGAACTCAACGTGCG CGGCCAGCAGACCAACGTCATCCAGCTGCTGGGCGAGTCGTTCAAACCGACCGACTTCGTGTCGCCGAAAAGCTTCCTCAGTCGCCTGTACTACAAGATG TTCGGCGGCACGCATCTGGTGAACCGCGCAGGCCTGGCCCGAACCTTCCAGAACATTCGTCTGTTCAAGGAAATGTCGGTACTGGAAAACCTGCTGGTGG CGCAGCACATGTGGGTCAACCGCAACATGCTGGCCGGCATCCTCAACACCAAGGGCTACCGCAAAGCGGAAAGCGATGCGCTGGATTGCGCGTTCTACTG GCTCGAAGTGGTGGATCTGGTGGACTGCGCCAACCGTCTGGCCGGTGAACTGTCCTACGGCCAGCAACGCCGTCTGGAGATCGCCCGGGCCATGTGCACG CGACCGCAGATCATCTGCCTCGACGAACCGGCCGCCGGCCTCAACCCTCAGGAAACCGAAGCGCTGAGCGCGATGATCCGGCTGCTGCGCGACGAGCACG ATCTGACCGTGGTGCTGATCGAACACGACATGGGCATGGTGATGAGCATTTCCGACCACATCGTGGTGCTGGACCACGGCATTGTCATCGCCGAGGGCGG GCCTGAGGCGATCCGCAACGATCCGAAAGTGATTGCCGCCTACCTGGGCGCCGACGAAGAGGAGCTGGTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAACCGATCCTCGAACTCAAAGATCTGGACGTGTTCTACGGCCCGATTCAGGCCCTCAAAGGCGTGTCGCTTGAGATCAACGAAGGCGAGACCGTCAG CCTGATCGGCTCCAACGGCGCGGGTAAGTCCACGCTGCTGATGTCGATCTTCGGCCAGCCACGGGCGGCGGGCGGGCAGATCCTCTATCAGGGCGTCGAC ATCACCCACAAGTCCTCGCACTACATCGCCTCCAACGGCATTGCGCAGTCGCCGGAAGGGCGGCGGGTGTTCCCCGACATGACCGTCGAGGAAAACCTGC TGATGGGCACCATCCCGATTGGCGACAAGTACGCCAAGGAGGACATGCAGCGCATGTTCGAGCTGTTCCCGCGGCTCGAAGAGCGCCGTACCCAGCGGGC GATGACCATGTCCGGCGGCGAGCAGCAAATGCTCGCCATTGCCCGCGCCCTGATGAGTCGGCCGAAATTGCTGCTGCTCGATGAGCCAAGCCTGGGCCTG
Amino Acid Sequence
>amino acid ABC transporter ATP-binding protein
MSEVVLSVEKLMMHFGGIKALSDVSLKVKRNSIFALIGPNGAGKTTVFNCLTGFYKASGGKIELNVRGQQTNVIQLLGESFKPTDFVSPKSFLSRLYYKM FGGTHLVNRAGLARTFQNIRLFKEMSVLENLLVAQHMWVNRNMLAGILNTKGYRKAESDALDCAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMCT RPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGIVIAEGGPEAIRNDPKVIAAYLGADEEELV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site