Pseudomonas sp. GM30, PMI25_003853
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01497 | Periplasmic binding protein | IPR002491 | ABC transporter periplasmic binding domain | 53 | 291 | 2.4E-27 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 145 | 313 | 2.7E-48 |
| PANTHER | PTHR30535 | VITAMIN B12-BINDING PROTEIN | - | - | 6 | 315 | 2.2E-55 |
| CDD | cd01148 | TroA_a | - | - | 25 | 309 | 0.0 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 21 | 138 | 3.9E-24 |
| SUPERFAMILY | SSF53807 | Helical backbone metal receptor | - | - | 42 | 314 | 5.49E-47 |
| Coils | Coil | Coil | - | - | 170 | 190 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.