Pseudomonas sp. GM30, PMI25_004348

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCCCGCCGCCGCAGCAACATGCCTCTGACACTGTCCCTGTACAGATCAGCGCAAAAAAAAACGCTTCTGCACCAGCGTCTGGCCAGTATCTGCAGGTG GGCGCGTTCGCCAACCCGGACGCTGCAGAACTCCTGAGGTCGAAGCTCAGCGGGATGGTGAGCGCTCCGGTGTTCATCAGCTCGATCGTGCGCAATCAGC AGACCCTGCACCGGGTGCGCCTGGGGCCGATCGGTTCGCCGGGTGAAATCGCCCAGGTGCAGAATAGCGTGCGCCTGGCCAATCTCGGCTCGCCGAGCGT GGTCACCGAGTAAGAAACGTAGCACTTGATTGACGGTTCACTTGCGGTTTTGGGGGGTGAACCAGGTTGTTGGCTCGTCGAAGAACAAAAGCCCGGCAAG GGTGACTGGAGTGAGCAACTGAACACGCGATGGCCCGTTAGAAGGCTGTCTGAATAGTTTTGCCCTCGGGCAAGTTTCCATTAGCGATTTCGAGAGACGG
DNA Sequence for Gene
>PMI25_004348
ATGAACATCACCACCTTTGCCAAACGCCTGTGTCTGCTAGTCCCGCTGCTCCTCTCGCCAGCCGCCTTCGCGGCCGAGATGATGCCGTCGCCACCTCAAC TGGCTGCAAAAGCCTACGTGCTCATGGACGCCAGCAGCGGCAACGTGCTGGTGGAGAACAACGGTGACCAGCGTCTGCCGCCAGCCAGCCTGACCAAACT GATGACTGCGTACATCGCTACGCTGGAAATCCGTCGTGGCCAGATCGGTGAAAACGACCCGGTGACCGTCAGCGAAAACGCCTGGCGTACCGGCGGTTCG CGGATGTTCATCAAAGTCGGCTCGCAAGTGACCGTCAGCGACCTGCTGCACGGCATCATCATTCAGTCCGGCAACGACGCCAGCGTGGCGCTGTCCGAGC ACATCGCCGGCAGCGAAGACGCGTTCGCCGACCTGATGAACAAGACGGTCGCCGATCTGGGCATGACCAACTCGCACTTCATGAACCCGACCGGTCTGCC GAACCCTGAGCACTACTCGTCGGCTCACGACATGGCGATCCTGGCCCGTGCAATCATCCACGAAGACCCGGCTCACTACGCGATCTACTCGCAGAAAGAG TTCTTCTGGAACGGCATCAAGCAGCCTAACCGCAACCTGCTGCTGTGGCGCGACAAGACCGTTGACGGTCTGAAAACCGGTCACACCGACGAAGCCGGCT ACTGCATGGTGTCCTCGGCGGTACGTGATGGCCAGCGTCTGATCGCCGTGGTGTTCGGCACCAACAGCGAAGTGGCTCGCGCCGCTGAAACCCAGAAGCT GCTGACCTACGGTTTCCGTTTCTTCGAAACCCAGACCTTCTACCAGAAGGGCACCGAACTGGCTCAGGCCCCGGTGTGGAAAGGCACCACCAGCCAAGTC AAGGCCGGCCTGGCTGAAGACCTGACCATGACCCTGCCAAAAGGCCAGCTGAAAAAGCTCGCTGCCAGCATGACCATGAACCCGCAACTGACCGCGCCAA TCGCCAAGGGCGACGTGATCGGTAAAGTCGAAGTGAAACTGGACGACAAGGTGGTGCACAGCGCTGACCTGATCGCCCTGGACGCTGTCGAGGAGGGTGG TATCTTCCGCCGCATGTGGGATAGCATCCGTCTATTCTTCTACGGCTTGTTCAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGAGTGTTGACCTGCATGGCCCCGTTCCTGTCCGGTTCGGGGCCATGTGCGTTACCACGGCTTACGCTTACGAGGCCGTTACGCCATGACCGATACCGA AGTAAAGGCGCCAAAGATCGAATTCCCCCAGGTTGATTATCCGGTTAAGGTAATCAGCGATACGGGCGTCGGGCACAAAGACAAGATCATCGAGATCGTG AAGAAATTCGCGACCATCAACGATGAGCGTGTCGACGAACGCTCGAGCAGCAACGGCAAGTACACCACCATCCAGCTGCACATCGTCGCGACCGATCAGG ATCAGCTGTACAACATCAACAGCGAACTGCGGGCGACCGGTTTCGTACACATGGTGTTGTGATGCCGGGCACGCTGGGCTTTCGCGAACTTGGCCAGATG GCTTACGAGCCGGTCTGGCATGCCATGCAACGCTTCACCAACGAACGCGGCAACGATGCCGCCGACGAGATCTGGCTGGTCGAGCACCCTCCGGTGTTCA
Amino Acid Sequence
>D-alanyl-D-alanine carboxypeptidase
MNITTFAKRLCLLVPLLLSPAAFAAEMMPSPPQLAAKAYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVALSEHIAGSEDAFADLMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIHEDPAHYAIYSQKE FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGQRLIAVVFGTNSEVARAAETQKLLTYGFRFFETQTFYQKGTELAQAPVWKGTTSQV KAGLAEDLTMTLPKGQLKKLAASMTMNPQLTAPIAKGDVIGKVEVKLDDKVVHSADLIALDAVEEGGIFRRMWDSIRLFFYGLFN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site