Pseudomonas sp. GM30, PMI25_004311

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACATTCAACTGCTCACCCTCAATGGCCGAAGAGGTCACGATGTTTTGCAGCAGTGCGTCGAGTTCGGTTTGTGCGCTCAGGGAGTTGCCAACGGAACC GGCCATTCCCATCAATTGGCCTTGTGCCTGCACGCACTCGCGCAACAAGGGTGCCAAACGTTCTGCTTGCCAGTTGAAATCGGGCCAATCCGGTTGTTGC CAGATCCATTGAGTCGTCATCTGTTTGCCTCTGATGGGGGCGTGAGCCGAATAGAAAGGTTATTCGGCTCATTTAGTGAGCCGAATATGACGGCTATTCG GCTCACCGTCCACCAAGAGGACGTGATTCTTACCGCAAATCCAGATGTATCCGATTGTTAAAAAACTGCCGAATCGCTAATCTTCGCGCCTTCTACGACC CTATAGTCACGGGGTCTTTCAGACGAAACGCAGTTTCCACCGCTGTGAAGTACCGAGGATCGGGTGCAAGGTTTCGTTCAGGCATGGCAGGAGGCATTAC
DNA Sequence for Gene
>PMI25_004311
ATGCGTTCATTTCTTTGGCTGCTGATCGGCTTGGCCTGCGCGCCTGCGCTGTGGGCGGCGCCGAGTGCCGAGCTGTCGGAACCGGTGGGTGGCTGGCGTT ATAACGGCTTGCTCGACCGCAGTGAAAACCCGCAAGTCGCTTACCCCACGCCGCCGATCGACCGCGGCATTCAGCGCAATCGCACGATGATCCAGGGCCA GCTCAAGGCCATCGGCAATCAGCGCGGACCGCACACCCTAGCGGTCAACGGCAATCCATTGAATCTGTACACCGACGATGACGGGCGGTTCGCCCGGCCC TATGCGTTCGGCGCCGGCTCCAATAGTGTCGAAGTGCGCAGCGCCGAGGGCCAGTCGCTCAAGCGCGTGCAGTTTTATGAGGCGAACAACCTGCGCACCC CGGCGAAGATCCGCGTGGTGCTCGGCTGGGACGATCCCAAGGCCGAACTCGACCTGCACATCATTACGCCGGACGGCCAGCATGCGTTTTTCGCCCACAC GGCGTTGACCAACGGCGGTGGACTGGACCCGGATGGTGTCGACGGCCCCGGCCCGGAAATGTTCACCATGACCGCGCCGCTGCATGGCACTTATCTGGTT TACGTCAACTATTGGGGCAACTTCGGCGACGGCGGCTATAACTTCGAGGAGGCCAGCAATCAGAACGAGGTCATCACCTCGCAAATCACGCTGGTGCTCA ACGAAAACACGGTCGACGAAAAACGCGAAACATTCATCGTGCCCCTGCGGGCGATCGGTGATCTGCTGCTGGTCAAGACTTTCAACTATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATCCCGCTCCACGGATGAACTTCGGGTTTTGTGAACATGAGTGATAACGCTGCTTCTCCGGTCGTCCCGACACCTGCCGGCCAACCTTCCCGGCGCTG GCCGGCGCTGCTGATCGGCCTGGTCCTGGTGGCCGGGGTGGCCGGTGGTCTCGGCTGGCTGCTGCACAAGCCCAAGGTGCCGGCGGCGGCACTTGCCAGT GACAAACTCGGCCTGAGCAGACCGGATGCACTGCTGGAAACCCGCTCCCTGAGCCAGTTGCCCAAGGAGCTGCTGACGGTGCCGTTTCTCAAGGCCACGC TCACCGAAGATTTCGTCTTCTATTACGAAACCCACGCCGACCGCCTGGGGTTGATCGGCAGCCTGCGGCGGATCATCTATGAGCACGACCTGAAGCTGCA GGACAGCCTGATCGAGCAGCTTTTCGATCAACCGGCCGACGTCGCGTTGTGGCGCGGTGCCGACGGCCGACTCAAGGATTTCCTGCTGGTGATGGACCGC
Amino Acid Sequence
>signal peptide protein
MRSFLWLLIGLACAPALWAAPSAELSEPVGGWRYNGLLDRSENPQVAYPTPPIDRGIQRNRTMIQGQLKAIGNQRGPHTLAVNGNPLNLYTDDDGRFARP YAFGAGSNSVEVRSAEGQSLKRVQFYEANNLRTPAKIRVVLGWDDPKAELDLHIITPDGQHAFFAHTALTNGGGLDPDGVDGPGPEMFTMTAPLHGTYLV YVNYWGNFGDGGYNFEEASNQNEVITSQITLVLNENTVDEKRETFIVPLRAIGDLLLVKTFNY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site