Pseudomonas sp. GM30, PMI25_004432
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM30 ctg16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGGAAATCGCCCGCCAGGCGTTATTGCCGACCTTGAAGGCCAAGTCCAGCGCGGTGATGGCGATCGACGGCGCAACCTTGGCTTTCACCGGGTCAATG ATGGTCGGGCTGAACAGCAACACTGCCATCAGCACCCGCAGCGGCTCGCGCAGCCAGCGCCACATCCAGCGGGTCAGGCGCATCCATACCAACAGGCAGC CCACAGCAGCAAAGGCGTAGAGGCCCCAGGCGATCAGATAGTCGTTCTCGGTCATGGTGTCCATGGCAAGGCAGGCAAAGAGGCGCTTATAGTAACGACT TTTCGCCTGTCAGGCTTGTCCCAATGCCAGACGGCCAACAGCAAACCCTGTGGGAGCGAGCCTGCTCGCGAAAGCGTCGGGTCAGTGAAACAAATGTCAT CTGACAGGACGCCTTCGCGAGCAAGCTCGCTCCCACAGGGAAGTACGATGGTTTAAAGCGCTGCGAAACCCCTATTCCGTATTTTGTCCGAGAGCCTTCC
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| DNA Sequence for Gene |
>PMI25_004432
ATGCCCGAATCCGCCCACGTCATCCGCGCCCCGATCGCCCGCAAGGCTGCCGGTGCCGACCCGTATGCCTGGCTGCAGGAACGCGACACCGACGCGGTGC TCGACTACCTCAAGGCTGAAAACGCCTATCAGGAAGCACAGACCGCCGATCAGGCCGGCCTGCGCGAAAGCCTGTTCGAGGAGATCAAGGGCCGGATCCT CGAAACCGACCTGTCCCTGCCCTCGCCCTGGGGCCCTTATCTGTATTACACCCGCACCACCGCTGGCGACGAATACGCTCGGCATTACCGCTGCCCGCGC CCGGCCGACGACAGCCTGACCCTCGACGAAAGCCGCGAGCAATTGCTGCTCGATCCCAACGTGCTGGCCAATGGCGGCTTCTTCTCGCTCGGCGCGTTCA GCATCAGCCCCGACCACCAGCGTTTGGCCTACAGCGTCGATGCCTCGGGCGACGAGATTTACACGCTGTTCGTCAAGGAACTGGCCAATGACAAGGTCAG CGAACTGGAGTTTCAGGACTGCGACGGCAGCATGACCTGGGCCAACGACAGCCTGACGCTGTTCTTTGGCGTGCTCGACGACACCCATCGCCCGCACAAA CTGTATCGCTATCGCCTCGACGGCACCGCCGCCGAAGAGGTGTTCCACGAGCCGGACGGACGTTTCTTCCTGCATTGCTACCGTTCCAGTTCCGAGCAGC AATTGCTGCTGACCCTGGGCAGCAAGACCACCAGTGAAGTCTGGGCGCTGGACGCGCATCAGCCGCACCTGCCCTTCACTTGCATGGCGCCACGGGTCGA GGATCACGAATACGATGTCGATCACGGTGCGCTGGATGGCGTGTGGACCTGGTTCATCCGCACCAATCGCGACGGCATCAACTTCGCCCTGTATCAGGCG CAGGACACCGGTGTCGTGCCGAGCGAGGCCGACTGGCAGAACCTGATCCCGCACAGCGATACGGTGATGCTCGACGGCGTGACGCTGAACACCGCGGCCA TGACCCTGAGCCTGCGCGAAGGCGGCTTGCCGGTCATCGAAGTTCACCCGCAAGGCCAGACGCCGTATCGCGTGCAACTGCCGGACGCGGCCTACAGCCT CTATGTGCAAAACAGCCTGGAGTTCGAGAGCGACCGCATCCGTCTGCGTTACGAGGCGCTGAATCGTCCGGCACAGGTGCGCCAATTGCTGCTGGCCAGC GGCGAACAAACCGTGCTGAAAGAAACTCCGGTGCTCGGCCCGTTCGACGCCGACGCTTATGTCAGCCAACGCCTGTGGGCCACGGCGCCGGACGGTACGC AGGTGCCGATCAGCCTGGTGATCAAACGCGAAATGGTCGGCAAACCGGTGCCGCTGTATCTGTACGGTTATGGCGCCTACGGTTCCAGCCTCGATCCGTG GTTCTCCCACGCGCGCCTGAGCCTGCTGGATCGCGGCATGGCCTTCGCCATCGCCCATGTGCGTGGGGGCGGTGAGCTGGGCGAGGCGTGGTATCGCGCT GGAAAACAGGAACACAAACACAACACCTTCAGCGACTTCATTGCCTGCGCCGAATTCCTGATCCTCAACGGCATCACCACCGCCGAGAAACTGGCGATCA GCGGCGGCAGTGCTGGCGGCTTGTTAATTGGTGCGGTGCTGAACCAGCGTCCGGATCTGTTCGGCGTGGCGATTGCCGAAGTACCGTTCGTCGACGTGCT CAACACCATGCTCGACCCGGACTTGCCGCTGACCGTCACCGAATACGACGAGTGGGGTAACCCTGAAGAGCCGGAGGTCTACGAGCGGATCAAGGCGTAC GCGCCGTACGAAAACGTCACCGCGCAGAATTATCCGGCAACCCTGGTCATCGCCGGCTACAACGACAGTCGCGTGCAGTACTGGGAAGCGGCCAAGTGGG TGGCGAAACTGCGCGCGACCAAGACCGACGACAACCTGCTGCTGCTCAAGACCGAACTCGGTGCCGGACATGGCGGCATGAGCGGGCGTTATCAGGGATT ACGTGACGTAGCACTCGAATATGCATTTGTGTTCAAGGTTTTGGGCCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAACTCCGTCGGTCACTTGGGTCTTAACTCCAGACCCAAGAGGCCGATACACCACAGATCCCTGTAGGAGTGAGCCTGTGTGGTGAGGGGATTTATCCC CGATGGGTGGCAAAGCCGCCCCAGATCTGCAATGCGATTCTTTCAGGCAGACCGCATTGGCTGATTTGCGACTGCTGCACAGCCGATCGGGGATAAATCC CCTCACCACAGGCTCACTCCTATAAGGATCCGTGTAGTGCCTTGAAAATGTGAAAACAATAAAGACCGCAACGACATGTCAGAACCGACCTTACTGAACA ACGAAATTCGCGACTGGCTGATGGACTGTGGCCTGTTCGATCAATTGCAACTGGCGGACTTCGCCGCGGCCTCGGGCTACTTCAGCATCAGCACCGTGGC TGAGGGCGAAGCGATCTTCCGTGAGGGTGATGCCGGCAGTTTCATGTGCATTCTCCACACCGGCCAGGTCGCGGTGCAGAAAACTGGCCCCGACGGCCAG
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| Amino Acid Sequence |
>peptidase S9
MPESAHVIRAPIARKAAGADPYAWLQERDTDAVLDYLKAENAYQEAQTADQAGLRESLFEEIKGRILETDLSLPSPWGPYLYYTRTTAGDEYARHYRCPR PADDSLTLDESREQLLLDPNVLANGGFFSLGAFSISPDHQRLAYSVDASGDEIYTLFVKELANDKVSELEFQDCDGSMTWANDSLTLFFGVLDDTHRPHK LYRYRLDGTAAEEVFHEPDGRFFLHCYRSSSEQQLLLTLGSKTTSEVWALDAHQPHLPFTCMAPRVEDHEYDVDHGALDGVWTWFIRTNRDGINFALYQA QDTGVVPSEADWQNLIPHSDTVMLDGVTLNTAAMTLSLREGGLPVIEVHPQGQTPYRVQLPDAAYSLYVQNSLEFESDRIRLRYEALNRPAQVRQLLLAS GEQTVLKETPVLGPFDADAYVSQRLWATAPDGTQVPISLVIKREMVGKPVPLYLYGYGAYGSSLDPWFSHARLSLLDRGMAFAIAHVRGGGELGEAWYRA GKQEHKHNTFSDFIACAEFLILNGITTAEKLAISGGSAGGLLIGAVLNQRPDLFGVAIAEVPFVDVLNTMLDPDLPLTVTEYDEWGNPEEPEVYERIKAY APYENVTAQNYPATLVIAGYNDSRVQYWEAAKWVAKLRATKTDDNLLLLKTELGAGHGGMSGRYQGLRDVALEYAFVFKVLGLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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