Pseudomonas sp. GM30, PMI25_004680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATTGAGGTAATCGATCATCGCCGCCAGCGTGGTCGATTTGCCGGACCCGGTCGGCCCGGTCACCAGCACCAGCCCGCGCGGCGCATCGGTGATCTTGCGA AACACGTCGCCCATGCCGAGGTCTTCCATGCTCAGCACTTTCGAGGGAATGGTGCGGAACACCGCGCCGGCGCCCCGGTTCTGGTTGAACGCGTTGACCC GAAAGCGCGCGACACCGGGGACTTCGAACGAGAAATCGGTTTCCAGGTGTTTCTCGAAGTCGACGCGCTGGGTGTCGTTCATGATGTCGTAGATCAATTC GTGCACTTGCTTGTGATCCAGCGCCGGCAGATTGATCCGCCGCACATCGCCATCAACGCGGATCATCGGCGGCAGACCGGCCGACAGGTGCAGGTCGGAA GCGCCCTGTTTGGCGCTGAACGCCAGCAGTTCAGTGATATCCATAGCGTCCCTCAATTCCAGTAGAATGCCGCGAACCTTCAGACCGCCGGCGCCTCTTG
DNA Sequence for Gene
>PMI25_004680
ATGTCCACGATAGCAGACAACATCCTTCAGGTTAGTTCGCGCATCCAGGCCGCGACCAAAGCGGCCGGTCGTGACGAAAACAGCGTTCAATTGCTCGCCG TCAGCAAGACGAAACCGGCGCAGGCCTTGCGTGAAGCCTACGCCGCCGGCCTGCGTGACTTTGGCGAGAACTATCTGCAGGAAGCCCTGGGCAAACAGCT CGAACTGGCCGACCTGCCCTTGATCTGGCACTTCATTGGCCCCATTCAATCGAACAAGACTCGCGCCATCGCCGAGCATTTCGACTGGGTGCACTCTGTG GATCGCCTGAAAATCGCCCAACGCCTGTCCGAACAGCGCCCGGCCGAGCTGCCGCCGCTGAACATCTGCATTCAGGTCAACGTCAGTGGTGAGGCCAGCA AGTCCGGCTGCACCCCGGCCGACCTGCCGGCGCTGGCCGAGGCCATCAGCGCCCTGCCGCGCCTGAAACTGCGCGGGCTGATGGCGATTCCCGAGCCGAC CGAAGATCGCGCCGAACAAGATGCCGCTTTTGCTGCCGTGCAACGTTTGCAGGCCAGCCTGAATCTGCCGCTCGACACACTTTCCATGGGCATGAGCCAC GACCTCGAGTCGGCCATCGCCCAGGGCGCCACCTGGGTGCGGATCGGTACCGCCCTGTTTGGCGCCAGAGATTACGGTCAGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGACAGCCATCTGAAAAAGGACCTGACATGAGCAACACACGCATTGCCTTTATCGGTGCCGGCAACATGGCCGCCAGCCTGATCGGCGGCCTGCGGGCC AAGGGTCTGCAAGCCAGCCAGATTCGCGCCAGCGATCCGGGCGAAGAGACCCGCCAGCGCGTCAGTGCCGAACACGGCATCGAAACCTTCGCCGACAACG CCCAGGCCATCGACGGCGTCGACGTGATCGTACTGGCGGTCAAGCCACAGGCGATGAAAGCCGTGTGCGAAGCCATCCGCCCCAGCCTGAAACCGCAGCA ACTGGTGGTGTCGATCGCCGCCGGCATCACTTGCGCGAGCATGACCGCGTGGCTCGGCGAGCAGCCAATCGTGCGCTGCATGCCGAACACCCCGGCGCTG CTGCGTCAGGGCGTCAGCGGCCTGTACGCCACCAGCGAAGTGACCGCCGAACAGCGTCAGCAGGCCGAAGAGCTGCTGTCCGCCGTCGGCATCGCGCTGT
Amino Acid Sequence
>hypothetical protein
MSTIADNILQVSSRIQAATKAAGRDENSVQLLAVSKTKPAQALREAYAAGLRDFGENYLQEALGKQLELADLPLIWHFIGPIQSNKTRAIAEHFDWVHSV DRLKIAQRLSEQRPAELPPLNICIQVNVSGEASKSGCTPADLPALAEAISALPRLKLRGLMAIPEPTEDRAEQDAAFAAVQRLQASLNLPLDTLSMGMSH DLESAIAQGATWVRIGTALFGARDYGQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site