Pseudomonas sp. GM30, PMI25_004881

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGCCGCCGAACGTGGCGAGCGTCTGGCCGATGTGAAAGTGCTGAGCCGCTACGAGCGTCGGCGCATGCCGCACAATCTGGCATTGATGGCGGCGATGG AGGGCTTCGAGCGCTTGTTCCAGGCTGATCCGCTGCCGGTGCGCTGGTTGCGTAACGCCGGGTTGAAGCTGGTGGAGCAGATGCCGGAGGCCAAGGCTCT CTTTGTTCGCGAAGCCCTTGGCCTCACAGGCGACCTCCCAGCGCTGGCCAAACCCTGAAGGCAATTACTTCTTTGTGGCGAGGGAGCTTGCTCCCGCTGG GCTGCGAAGCGGCCCCAAAAGCCATTTTGGCAGCATTGGGAGTCCTTCGGCCTCCAGCGGGAGCAAGCTCCCTCGCCACAGAGACCAGCAATTTGCAGGT CATGCAACATCTGGTAACTCCTTGGAAAAGAGTTCGATTGAGGTGGTAAATGTGAGTCCTTATCATTTGGCCCACATTTTCCGACCGAGAGATCACTCCC
DNA Sequence for Gene
>PMI25_004881
ATGTTGGCACCCAAGCGTCTTCTGACTGCACTGGCCCTGACCCTGATCGGCAGCACCACCGCCCAGGCCGCCGACGAGGTGGTGGTCTACTCCTCGCGTA TCGATGAGCTGATCAAACCGGTATTCGACGCCTACACCGCAAAAACCGGGGTGAAGATCAAGTTCATCACCGACAAGGAAGCGCCGTTGATGCAGCGGAT CAAGGCCGAAGGCGAAAACGCCACCGCCGACCTGCTGCTCACCGTCGATGCCGGCAACCTCTGGCAGGCCGAGCAGATGGGCATTCTGCAGCCGTTCACT TCCAAGACCATCGACGCCAACATTCCCCTGCAATATCGCTCCTCCAGCCACGCCTGGACCGGTCTGAGCCTGCGCGCGAGAACCATCGCTTACTCCACCG AGCGCGTTAAGCCGGGCGAACTGACCACCTACGAAGCGCTGGCCGACAAGAACTGGGAAGGGCGCCTGTGCCTGCGCACGGCGAAGAAGGTCTACAACCA GTCGCTGACCGCGACCATGATCGAAGTGCACGGCGCCGAGAAGACCGAGAAGATCCTCAAGGGCTGGGTCAACAACCTGTCCACCGATGTGTTCTCCGAC GACGTTGCGGTGCTGGAGGCGATCAACGCCGGCCAGTGCGACGTCGGCATCGTCAACACCTACTACTACGGGCGCCTGCACAAGCAGAAACCGGACCTGC CGGTGAAACTCTTCTGGCCGAATCAGGCCGATCGCGGCGTGCATGTGAACCTGTCGGGTATCGGTCTGACCAAACATGCACCGCACCCGGAAGCCGCCAA GGCGCTGGTCGAGTGGATGACCACGCCTGAGGCGCAGAAGATCTTCGCCGACGTCAACCAGGAATTCCCGGCCAATCCGGCAGTGGCACCTTCGGAAGAA GTGGCGGCGTGGGGCAAGTTCGTCGCTGATACCTTGCCGGTGGAAGTGGCGGGCAAGCGTCAGGCCGAGGCCATCCGCATGATGGATCGGGCGGGCTGGA ACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCTGGTTATATCCTGTGGCGAGGGGATTTATCCCCGATCGGATGCGCAGCATTCGTAAAGGCTACGCCCGCGGTGTATCAGCACGCCTTGATTAACGA CATTGGGGGTGCTTCGCACCCCATCGGGGATAAATCCCCTCGCCACAATCGGGGCTGGCGTTACGCTTGCGCCTACCCATGATTTATTAGAGAACCCCCT TGGCCCACCCCGCCCAACGCCGCTGGTACCCCATCGTCCTCGCCATTGCCGCGCTGGTGCTGTTGCCCCTGAGTGTCCTGCTGCTGTCGTGGCAGACCAT CGATCAGCAGATCTGGTCGCACCTGTGGGAAACCCAGATGCCGCGCCTGCTGGGCAACACCCTGACGCTGGTGCTAGGCGTCGGCGTCGGCGTGACGCTG CTCGGTGTCAGCCTCGCCTGGCTCACCAGCCTCTGCGAATTCCCCGGAAGACGCTGGCTCGACTGGGCGCTGATGCTGCCGTTCGCCATCCCGGCCTACG
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLAPKRLLTALALTLIGSTTAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKEAPLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFT SKTIDANIPLQYRSSSHAWTGLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRTAKKVYNQSLTATMIEVHGAEKTEKILKGWVNNLSTDVFSD DVAVLEAINAGQCDVGIVNTYYYGRLHKQKPDLPVKLFWPNQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVAPSEE VAAWGKFVADTLPVEVAGKRQAEAIRMMDRAGWN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site