Pseudomonas sp. GM30, PMI25_005169

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGCCCGAGCGAAGCGATCGTGGTCTCCACCTTCCACATCGAACTCGATGGCGG TGGCGGTGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTACGCGAAATGCTCGACGCCGGTTTCCAGTCGGACCTCGACGATCAGGACGAG CGCTGGGTCAACGCCCTGCGTCAGGACGTGCTCGATGTCGACGTACCGATCGGCGCCACCGTGGCCCGCCGCCAGTTGAAGCTGCGCGACATCCTGCACA TGCAGCCGGGGGATGTGATCCCGGTCGAAATGCCGGAAGACATGATCATGCGCGCCAACGGCGTACCGGCCTTCAAGGTCAAGATGGGCTCGCACAAAGG CAACCTCGCGTTGCAGGTGATCGAGCCGATCGAGCGGCGCTGAAGCGTCGCTCTCACCCCCCACGCATTTAACTGAATTGTTGCCCGCCGAGGACACATG
DNA Sequence for Gene
>PMI25_005169
ATGAACGACGAAATGAACGCCCAGGACGATCAGGCACTGGCCGACGAATGGGCTGCGGCCCTGGAAGAGACCGGTGATGGCAGCCAGGCTGACATCGACG CACTGCTGGCCGCCGACGCTGGCGCTGCAAGCTCCAACCGTCTGCCGATGGAAGAGTTCGGCAGCGTGCCGAAAAACAACGATCCGGTGACCCTGGACGG TCCGAACCTGGACGTGATCCTCGACATCCCGGTGTCGATCTCGATGGAAGTGGGCAGCACCGACATCAACATCCGCAACCTGCTGCAACTGAACCAGGGT TCGGTGATCGAGCTCGATCGTCTGGCCGGTGAGCCGCTGGACGTGCTGGTCAACGGCACGCTGATTGCGCACGGCGAAGTGGTGGTGGTCAACGAGAAGT TCGGTATCCGCCTGACCGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAACGGTTTCTCTGGGCTTTGCTGGCATTGCCATTGAGCGTGCTGGCCGCCGAGCCGTCGACGGCGACGACCGTGCCTGCTGCCACCGCGCCGATGG TCAACAGCGGCGTGGCCGGGCAACTGACGCAACTGGTGTTCGGTCTGTTGCTGGTGCTGGGGTTGATCTTCTTCCTCGCCTGGCTGCTGCGCCGGGTGCA ACAGTCGGGGCCGGCGGGCAAGGGCCAGGTGATCGAACTGATCGGCTCCCGCGCGCTCGGCCCGCGTGACCGGTTGATGCTGGTGCAGGTCGGCAACGAG CAGATTCTGCTCGGCTTGAGCCCTGGCACCATCACCGCGCTGCACGTGCTCAAGGAGCCGGTGCAAGTGCCGAGCAGCAGTGAAAAAGCGACCCCGGAAT TTGCCCAGCATCTGCTGAAGATTCTCGGCAAGGATCAGAAGGATAAGAAGTAATGGGTGCGCTACGCATCGTCTTGACGCTGGCCCTGATGCTGGCCGCG
Amino Acid Sequence
>flagellar motor switch protein FliN
MNDEMNAQDDQALADEWAAALEETGDGSQADIDALLAADAGAASSNRLPMEEFGSVPKNNDPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQG SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site